Gene SeD_A1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1953 
Symbol 
ID6871607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1882898 
End bp1883857 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content56% 
IMG OID642785073 
Productputative inner membrane protein 
Protein accessionYP_002215739 
Protein GI198243073 
COG category[S] Function unknown 
COG ID[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.00183177 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAACA AACCCGTAGT CGGCATTAGC GGATGTCTGA CTGGCGCCAC GGTACGCTTT 
GATGGCGGAC ATAAGCGTAT GGATTTTGTC ATGAACTCTC TGGCGCCGTG GGTGGACTAC 
AAACCGATCT GCCCGGAGGT GGCGATCGGC CTGCCCGTGC CTCGCCCTGC GCTGCGTCTT 
ATCCAGACGA CCTGTGGCGA CATTCGGATG CGCTATAGCC ATGCCCCGCA CGATGACGTC 
ACCGAGCGAA TGAATGCCTT TGCCGATCGG TTTCTGCCAA CAATAGGCGA ACTGGCGGGG 
TTTATTGTGT GTGCAAAATC GCCCAGTTGC GGAATGGAGC GCGTTCGCCT GTATGATGAA 
AAGGGTAACA GGGGCCGCAA AGCTGGCACG GGGCTGTTTA CCGCCGCGAT GATGGACAAA 
TATCCCTGGC TGCCGATAGA GGAAGATGGT CGCCTGCACG ATCCGGTACT ACGCGAGAAT 
TTCATCGCAC GTATCTTCGC GCTACATGAA TTAAATGCGC TACGCGCGCA GGGCTTGAGT 
CGTCACAGTT TGCTCGCGTT TCATAGCCGA TACAAACTTC AGCTTCTCGC CCACCACCAG 
GCCGGCTACC GCGAAATTGG CCCTTTCGTC GCGCGTCTGC ATGAGTGGGG CGATCTGGAT 
GCCTTCTTTG TCCGATACAG AGAAAAACTG ATGGCTATCC TGCGCCACCC CGCTTCACGT 
AAAAATCACA CCAATGTGCT GATGCATATC CAGGGCTATT TTCACCGCGC GTTGAACAGC 
AGGCAACGCG CGGAATTACG CGAGGTGATT CTCGGCTACC GGGCGGGCCA ACTACCTATC 
CTGGCACCGT TAACGCTGCT GAAGCACTAT CTGGCGGAAC ATCCAGATGA CTATCTACGC 
AGCCAGAATT ATTTTGAGCC GTACCCTGAT ACGTTAGGGC TGCGCTTAGC CATCACCTGA
 
Protein sequence
MNNKPVVGIS GCLTGATVRF DGGHKRMDFV MNSLAPWVDY KPICPEVAIG LPVPRPALRL 
IQTTCGDIRM RYSHAPHDDV TERMNAFADR FLPTIGELAG FIVCAKSPSC GMERVRLYDE 
KGNRGRKAGT GLFTAAMMDK YPWLPIEEDG RLHDPVLREN FIARIFALHE LNALRAQGLS 
RHSLLAFHSR YKLQLLAHHQ AGYREIGPFV ARLHEWGDLD AFFVRYREKL MAILRHPASR 
KNHTNVLMHI QGYFHRALNS RQRAELREVI LGYRAGQLPI LAPLTLLKHY LAEHPDDYLR 
SQNYFEPYPD TLGLRLAIT