| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1934 |
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| Symbol | |
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| ID | 6874182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1867022 |
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| End bp | 1867771 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 642785056 |
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| Product | type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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| Protein accession | YP_002215722 |
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| Protein GI | 198244261 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.464381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGTTC ATCGTATAGT ATTTCTTACT GTCCTTACGT TCTTTCTTAC GGCATGTGAT
GTGGATCTTT ATCGCTCATT GCCAGAGGAT GAGGCGAATC AAATGCTGGC ATTACTTATG
CAGCATCATA TTGATGCGGA AAAAAAACAG GAAGAGGACG GTGTTACCTT ACGTGTCGAG
CAGTCGCAGT TTATTAATGC GGTTGAGCTA CTTAGACTTA ACGGTTATCC GCATCGTCAG
TTTACAACGG CGGATAAGAT GTTTCCGGCT AATCAGTTAG TGGTATCACC CCAGGAAGAA
CAGCAGAAGA TTAATTTTTT AAAAGAACAA AGAATTGAAG GAATGCTGAG TCAGATGGAG
GGCGTGATTA ATGCAAAAGT GACCATTGCG CTACCGACTT ATGATGAGGG AAGTAACGCT
TCTCCGAGCT CAGTTGCCGT ATTTATAAAA TATTCACCAC AGGTCAATAT GGAGGCCTTT
CGGGTAAAAA TTAAGGATTT AATAGAGATG TCAATCCCTG GGTTGCAATA CAGTAAGATT
AGTATCTTGA TGCAGCCTGC TGAATTCAGA ATGGTAGCTG ACGTACCCGC GAGACAAACA
TTCTGGATTA TGGACGTTAT CAACGCCAAT AAAGGGAAGG TGGTGAAGTG GTTGATGAAA
TACCCTTATC AGTTGATGTT ATTGTTGACA GGACTGTTAT TAGGAGTGGG CATCCTGATC
GGCTATTTTT GCCTGAGACG CCGTTTTTGA
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| Protein sequence | MKVHRIVFLT VLTFFLTACD VDLYRSLPED EANQMLALLM QHHIDAEKKQ EEDGVTLRVE
QSQFINAVEL LRLNGYPHRQ FTTADKMFPA NQLVVSPQEE QQKINFLKEQ RIEGMLSQME
GVINAKVTIA LPTYDEGSNA SPSSVAVFIK YSPQVNMEAF RVKIKDLIEM SIPGLQYSKI
SILMQPAEFR MVADVPARQT FWIMDVINAN KGKVVKWLMK YPYQLMLLLT GLLLGVGILI
GYFCLRRRF
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