| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1928 |
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| Symbol | |
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| ID | 6873935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1861056 |
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| End bp | 1862387 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642785051 |
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| Product | type III secretion system ATPase |
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| Protein accession | YP_002215717 |
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| Protein GI | 198243404 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
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| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.805786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCTTAG CGAAGAGGAG TTGGCGGACA ATGAAGAATG AATTGATGCA ACGTCTGAGG
CTGAAATATC CGCCCCCCGA TGGTTATTGT CGATGGGGCC GAATTCAGGA TGTCAGCGCA
ACGTTGTTAA ATGCGTGGTT GCCTGGGGTA TTTATGGGCG AGTTGTGCTG TATAAAGCCT
GGAGAAGAAC TTGCTGAAGT CGTGGGGATT AATGGCAGCA AAGCTTTGCT ATCTCCTTTT
ACGAGTACAA TCGGGCTTCA CTGCGGGCAG CAAGTGATGG CCTTAAGGCG ACGCCATCAG
GTTCCCGTGG GCGAAGCGTT ATTAGGGCGA GTTATTGATG GCTTTGGTCG TCCCCTTGAT
GGCCGCGAAC TGCCCGACGT CTGCTGGAAA GACTATGATG CAATGCCTCC TCCCGCAATG
GTTCGACAGC CTATCACTCA ACCATTAATG ACGGGGATTC GCGCTATTGA TAGCGTTGCG
ACCTGTGGCG AAGGGCAACG AGTGGGTATT TTTTCTGCTC CTGGCGTGGG GAAAAGCACG
CTTCTGGCGA TGCTGTGTAA TGCGCCAGAC GCAGACAGCA ATGTTCTGGT GTTAATTGGT
GAACGTGGAC GAGAAGTCCG CGAGTTCATC GATTTTACAC TGTCTGAAGA GACCCGAAAA
CGTTGTGTCA TTGTTGTCGC AACCTCTGAC AGACCCGCCT TAGAGCGCGT GAGGGCGCTG
TTTGTGGCCA CCACGATAGC AGAATTTTTT CGCGATAATG GAAAGCGAGT CGTCTTGCTT
GCCGACTCAC TGACGCGTTA TGCCAGGGCC GCACGGGAAA TCGCTCTGGC CGCCGGAGAG
ACCGCGGTTT CTGGAGAATA TCCGCCAGGC GTATTTAGTG CATTGCCACG ACTTTTAGAA
CGTACAGGAA TGGGGGAAAA AGGCAGTATT ACCGCATTTT ATACGGTACT GGTGGAAGGC
GATGATATGA ATGAGCCGTT GGCGGATGAA GTCCGTTCAC TACTTGATGG ACATATTGTG
CTATCCCGGC GGCTTGCAGA GAGGGGGCAT TATCCTGCCA TTGACGTGCT GGCAACGCTC
AGCCGCGTTT TTCCAGTCGT TACCAGCCAT GAGCATCGTC AACTGGCGGC GATATTGCGG
CGGCGCCTGG CGCTTTACCT GGAGGTTGAA CTGTTAATAC GCATTGGGGA ATACCAGCGA
GGAGTTGATA CTGATACTGA CAAAGCCATT GATACCTATC CGGATATTTG CACATTTTTG
CGACAAAGTA AGGATGAAGT ATGCGGACCC GAGCTACTTA TAGAAAAATT ACACCAAATA
CTCACCGAGT GA
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| Protein sequence | MTLAKRSWRT MKNELMQRLR LKYPPPDGYC RWGRIQDVSA TLLNAWLPGV FMGELCCIKP
GEELAEVVGI NGSKALLSPF TSTIGLHCGQ QVMALRRRHQ VPVGEALLGR VIDGFGRPLD
GRELPDVCWK DYDAMPPPAM VRQPITQPLM TGIRAIDSVA TCGEGQRVGI FSAPGVGKST
LLAMLCNAPD ADSNVLVLIG ERGREVREFI DFTLSEETRK RCVIVVATSD RPALERVRAL
FVATTIAEFF RDNGKRVVLL ADSLTRYARA AREIALAAGE TAVSGEYPPG VFSALPRLLE
RTGMGEKGSI TAFYTVLVEG DDMNEPLADE VRSLLDGHIV LSRRLAERGH YPAIDVLATL
SRVFPVVTSH EHRQLAAILR RRLALYLEVE LLIRIGEYQR GVDTDTDKAI DTYPDICTFL
RQSKDEVCGP ELLIEKLHQI LTE
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