Gene SeD_A1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1913 
SymbolpurR 
ID6871770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1849103 
End bp1850128 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content54% 
IMG OID642785036 
ProductDNA-binding transcriptional repressor PurR 
Protein accessionYP_002215704 
Protein GI198244384 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000592501 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAA TTAAAGATGT AGCGAAACGA GCAAACGTTT CCACTACAAC TGTATCACAC 
GTAATCAACA AAACGCGTTT TGTCGCTGAA GAAACGCGTA ACGCGGTCTG GGCGGCAATT 
AAAGAGCTGC ACTACTCTCC CAGCGCCGTC GCGCGTAGCC TGAAGGTTAA CCATACCAAG 
TCGATAGGCT TACTGGCGAC CAGCAGCGAA GCGGCCTATT TTGCCGAAAT TATCGAGGCG 
GTTGAAAAAA ATTGTTTCCA GAAAGGCTAT ACGCTGATTT TAGGCAACGC CTGGAATAAC 
CTGGAAAAAC AGCGCGCCTA CCTGTCCATG ATGGCGCAAA AGCGCGTGGA TGGCCTGCTG 
GTGATGTGTT CTGAGTATCC AGAACCTCTG CTTTCCATGC TGGAAGAGTA TCGCCATATT 
CCGATGGTGG TGATGGACTG GGGCGAGGCG AAGGCCGATT TTACCGACAC GGTGATTGAT 
AACGCCTTTG CAGGCGGCTA TATGGCGGGT CGTTATCTGG TTGAGCGCGG CCACCGGGAT 
ATCGGCGTTA TTCCCGGCCC GCTGGAGCGC AACACCGGCG CGGGCCGGCT GGCAGGCTTT 
ATGAAAGCCA TGGAGGAGGC GCTGATCAAC GTGCCGGACA ACTGGATTGT TCAGGGCGAC 
TTCGAGCCGG AATCCGGTTA CCACGCGATG CAGCAAATTT TATCGCAGTC ACATCGCCCT 
ACCGCCGTTT TCTGCGGCGG CGATATTATG GCGATGGGCG CGCTTTGCGC GGCTGACGAA 
ATGGGGCTTC GCGTACCGCA GGACGTTTCG GTGATCGGTT ATGACAATGT GCGTAACGCC 
CGTTACTTTA CCCCGGCGCT GACGACGATT CACCAGCCCA AAGACTCTTT AGGCGAAACC 
GCATTTAATA TGCTATTGGA TCGCATCGTC AATAAGCGTG AAGAGTCACA GTCTATTGAA 
GTTCATCCAC GCCTGGTTGA GCGTCGCTCG GTCGCTGACG GCCCGTTCCG CGACTATCGG 
CGTTAA
 
Protein sequence
MATIKDVAKR ANVSTTTVSH VINKTRFVAE ETRNAVWAAI KELHYSPSAV ARSLKVNHTK 
SIGLLATSSE AAYFAEIIEA VEKNCFQKGY TLILGNAWNN LEKQRAYLSM MAQKRVDGLL 
VMCSEYPEPL LSMLEEYRHI PMVVMDWGEA KADFTDTVID NAFAGGYMAG RYLVERGHRD 
IGVIPGPLER NTGAGRLAGF MKAMEEALIN VPDNWIVQGD FEPESGYHAM QQILSQSHRP 
TAVFCGGDIM AMGALCAADE MGLRVPQDVS VIGYDNVRNA RYFTPALTTI HQPKDSLGET 
AFNMLLDRIV NKREESQSIE VHPRLVERRS VADGPFRDYR R