Gene SeD_A1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1904 
Symbol 
ID6875592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1842078 
End bp1842974 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content53% 
IMG OID642785027 
Productoxidoreductase YdhF 
Protein accessionYP_002215695 
Protein GI198245093 
COG category[R] General function prediction only 
COG ID[COG4989] Predicted oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.746399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAGC GTGTCACCAT CGCTCCACAA GGCCCGGAGT TTTCGCGTTT TGTCATGGGT 
TACTGGCGTT TGATGGACTG GAATATGTCC GCGCGTCAGT TAGTGAGTTT TATCGAAGAA 
CATCTGGATT TGGGCGTCAC TACCGTTGAC CATGCGGACA TTTATGGCGG TTATCAGTGC 
GAAGCGGCGT TTGGCGAGGC GCTAACGCTG GCACCGCATT TGCGGGAAAG ACTGCAAATC 
GTCACCAAAT GCGGTATTGC GACCACCGCC AGAGCGGAAA ATAGACTCGG TCATTATATT 
ACCGATCGCC GCCATATTAT TCTGAGCGCC GAACAGTCAT TAAAAAATCT GGCGACAGAT 
TATCTGGATA TGTTGTTAAT TCACCGTCCC GATCCGTTAA TGGATGCGGA TGACGTCGCC 
GAGGCGTTTC AACATCTGCA CCAAAGCGGC AAAGTGCGCC ATTTTGGCGT TTCTAATTTT 
ACGCCAGCGC AATTTACGTT GCTGCAATCG CGCCTGCCTT TCACCCTGGC GACCAACCAG 
GTGGAGATCT CGCCGGTTCA CCAGCCTTTG TTGCTGGACG GCACATTAGA TCAATTACAG 
CAACTGCGTA TTCGTCCGAT GGCCTGGTCA TGTCTTGGCG GCGGTCGGCT GTTTAATGAT 
GAGGCTTATC AGCCGTTGCG CCAGGAACTT TCCGTTATCG CGCAAGAACT CAACGCCAGT 
TCTATTGAAC AGGTGGTCTA TGCCTGGATT TTACGTTTGC CGTCGCAGCC GCTGCCGATT 
ATTGGCTCGG GTAAAATCGA ACGCGTACGC GCCGCACTAG AAGCGGAAAC GCTGTCATTG 
TCGCGTCAAC AGTGGTTCCG AATCCGCAAG GCGGCACTGG GTTATGACGT GCCGTAA
 
Protein sequence
MVQRVTIAPQ GPEFSRFVMG YWRLMDWNMS ARQLVSFIEE HLDLGVTTVD HADIYGGYQC 
EAAFGEALTL APHLRERLQI VTKCGIATTA RAENRLGHYI TDRRHIILSA EQSLKNLATD 
YLDMLLIHRP DPLMDADDVA EAFQHLHQSG KVRHFGVSNF TPAQFTLLQS RLPFTLATNQ 
VEISPVHQPL LLDGTLDQLQ QLRIRPMAWS CLGGGRLFND EAYQPLRQEL SVIAQELNAS 
SIEQVVYAWI LRLPSQPLPI IGSGKIERVR AALEAETLSL SRQQWFRIRK AALGYDVP