Gene SeD_A1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1894 
SymboltyrS 
ID6874129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1833279 
End bp1834553 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content53% 
IMG OID642785017 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_002215685 
Protein GI198244916 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA GTAACTTGAT TAAACAATTG CAAGAGCGGG GGCTGGTAGC CCAGGTGACG 
GACGAAGACG CGTTGGCAGA GCGACTGGCG CAAGGCCCGA TCGCGCTCTA TTGCGGCTTC
GATCCTACCG CTGACAGCTT GCATTTGGGG CATCTGGTTC CATTGTTATG CCTGAAACGC
TTCCAGCAGG CAGGGCACAA ACCTGTTGCG CTGGTAGGCG GCGCGACCGG TCTGATTGGC
GACCCGAGCT TTAAAGCTGC CGAGCGTAAA CTGAACACTG AAGAGACCGT TCAGGAGTGG
GTGGCGAAAA TTCGTAAACA GGTTGCCCCA TTCCTGGACT TTGATTGCGG CGAAAACTCC
GCCATCGCGG CCAATAACTA TGACTGGTTC GGCAGCATGA ATGTGCTGAC TTTCCTGCGC
GATATCGGTA AACATTTTTC CGTTAATCAG ATGATCAACA AAGAAGCGGT GAAGCAGCGT
CTGAACCGTG ACGATCAGGG TATCTCTTTC ACGGAGTTCT CTTATAACCT GCTACAGGGG
TACGACTTCG CTTGTCTGAA TAAACTGCAC GGCGTTGCCT TACAGATTGG CGGTTCTGAC
CAGTGGGGGA ACATCACTTC CGGTATCGAC CTGACCCGTC GCCTGCACCA GAATCAGGTA
TTTGGTTTGA CCGTTCCGCT GATCACCAAA GCTGACGGCA CGAAATTCGG TAAAACCGAA
GGCGGCGCTG TCTGGCTGGA TCCGAAGAAA ACCAGTCCGT ACAAATTCTA CCAGTTCTGG
ATTAACACCG CAGATGCCGA TGTTTATCGC TTCCTGAAAT TCTTCACTTT TATGGACATT
GAAGAGATCA ATGCCCTGGA AGAAGAAGAT AAAAACAGCG GTAAAGCGCC GCGCGCGCAG
TATGTACTGG CCGAGCAAGT GACGCGCCTG GTTCATGGTG AAGAGGGGCT GGTCGCGGCG
AAACGGATCA CTGAATGCCT GTTCAGCGGT TCACTGAGCG CGCTGAGCGA AGCTGACTTT
GAGCAGTTGG CGCAGGACGG CGTACCGATG GTTGAAATGG AAAAAGGCGC CGACCTGATG
CAGGCGCTGG TAGATGCCGA ACTCCAGCCG TCGCGTGGTC AGGCGCGTAA GACTATCGCC
TCCAACGCTG TCACTATCAA TGGTGAAAAA CAATCCGATC CTGAATACAT CTTTAACGAT
GAGGACCGTC TGTTTGGCCG CTATACCTTA TTACGTCGCG GCAAAAAGAA CTATTGTCTG
ATTTGCTGGA AATAA
 
Protein sequence
MASSNLIKQL QERGLVAQVT DEDALAERLA QGPIALYCGF DPTADSLHLG HLVPLLCLKR 
FQQAGHKPVA LVGGATGLIG DPSFKAAERK LNTEETVQEW VAKIRKQVAP FLDFDCGENS
AIAANNYDWF GSMNVLTFLR DIGKHFSVNQ MINKEAVKQR LNRDDQGISF TEFSYNLLQG
YDFACLNKLH GVALQIGGSD QWGNITSGID LTRRLHQNQV FGLTVPLITK ADGTKFGKTE
GGAVWLDPKK TSPYKFYQFW INTADADVYR FLKFFTFMDI EEINALEEED KNSGKAPRAQ
YVLAEQVTRL VHGEEGLVAA KRITECLFSG SLSALSEADF EQLAQDGVPM VEMEKGADLM
QALVDAELQP SRGQARKTIA SNAVTINGEK QSDPEYIFND EDRLFGRYTL LRRGKKNYCL
ICWK