Gene SeD_A1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1877 
Symbol 
ID6875228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1817412 
End bp1818920 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content53% 
IMG OID642785003 
Producthypothetical protein 
Protein accessionYP_002215671 
Protein GI198241766 
COG category[S] Function unknown 
COG ID[COG5339] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.710418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CACTGGTAGC TGCAGGTGTA GTTATTGCAC TTGGCATCGT CTGGACAGGC 
GGCGCCTGGT ATACGGGGAA AAAGCTGGAG AACCATCTTT CAGAAATGGT GACTCAGGCC
AATGAACAGC TCAAGCGTAC TGCGCCGGAG GCCGGTGTCG AATTAAGTTA TCAAAACTAC
CAGCGTGGCG TGTTCAGTAG CCATCTGCAA CTGGTTGTCA AACCGGTTGC CGGCGCAGAC
ACTACCTGGT TGAAGCCCGG GCAAAGCATT GTGCTGGACG AGTCCGTTTC ACATGGCCCC
TTCCCGCTCG CCCAGCTCAA AACGCTCAAT CTGATCCCTT CTATGGCGTC GGTAAAAACC
ACGCTGGTGA ATAACGATGC GGCAAAACCC CTCTTTGATA TCGCGAAAGG CGACACGCCC
TTTGTTATCA ATACCCGCAT TGGTTATGGC GGCGATACCC GCTCCGATAT CTCTCTCAAG
CCGTTAAACT ACGAGAATGC CGGTGAAAAG GTCGCCTTTA GCGGCGGCGA GTTCCAGCTT
AACGCCGATA AAGACGGTAA TGTGGTTTCG CTGTCGGGCG AAGCGCAGAG CGGCCTGGTC
GATGCCGTTA ACGAATATAA CCAGAAGGTC CAACTCACCT TTAATAATTT GAAAACCGAC
GGTACCAGTA AACTGGCAAG CTTTGGCGAA CGTGTGGGCG ACCAAAAGTT AACGCTGGAT
AAACTGTCCA TCGCCATTGA GGGTAAAGAG ATGGCGGTGC TGGAAGGGAT GGAAATTGCC
GGCAAGTCCG ATCTCGTCAA CGACGGAAAA ACCATTAACA GCCAGTTGGA TTACTCGCTT
AACAGCCTGA AAGTGCAGAA TCAGGATTTG GGCAGCGGTA AATTAACGCT GAAAGTCGGT
CAAATCGACG GCGAAGCCTG GCACCAGTTT AGTCAGCAAT ATCATGCACA AACGCAGGCG
CTGCTGAATC AGCCGGACGT GGCGCAGAAT CCTGAGCTTT ATCAGCAAAA AGTCACTGAA
GCGTTCTTTA GCGCTCTCCC CGTGCTGTTA AAAGGCGATC CGGTACTGAC CCTGGCGCCG
CTTAGCTGGA AAAACGCCAA AGGGGAAACC ACGCTGAATC TGTCGCTGTT CCTCAAAGAT
CCGGCAACCA CAACGGCACA ACCGCAAACG CTGGCGCAGG AAGTCGACCG CTCCGTGAAA
TCGCTGGATG CGAAACTGGC AATTCCGATG GACATGGCGG TCGAGTTTAT GACGCAGATA
GCAAAGCTGG AAGGCTATCA GCAGGATGAT GCGGAAAAAC TGGCAAAACA GCAGGTGCAG
GGGCTGTCCG CAATGGGTCA GATGTTCCGA CTGACAACGC TGAAGGATAA TACTATCGCC
TCCAGTTTGC AGTACGCCAA TGGCCAGATC ACGCTCAACG GACAAAAAAT GCCGTTGGAA
GACTTTGTCG GCCTGTTTGG GATGCCGGCG CTTTCCGTAC CGGACGTTCC GGCGCTGCCT
CAACAATAA
 
Protein sequence
MKKTLVAAGV VIALGIVWTG GAWYTGKKLE NHLSEMVTQA NEQLKRTAPE AGVELSYQNY 
QRGVFSSHLQ LVVKPVAGAD TTWLKPGQSI VLDESVSHGP FPLAQLKTLN LIPSMASVKT
TLVNNDAAKP LFDIAKGDTP FVINTRIGYG GDTRSDISLK PLNYENAGEK VAFSGGEFQL
NADKDGNVVS LSGEAQSGLV DAVNEYNQKV QLTFNNLKTD GTSKLASFGE RVGDQKLTLD
KLSIAIEGKE MAVLEGMEIA GKSDLVNDGK TINSQLDYSL NSLKVQNQDL GSGKLTLKVG
QIDGEAWHQF SQQYHAQTQA LLNQPDVAQN PELYQQKVTE AFFSALPVLL KGDPVLTLAP
LSWKNAKGET TLNLSLFLKD PATTTAQPQT LAQEVDRSVK SLDAKLAIPM DMAVEFMTQI
AKLEGYQQDD AEKLAKQQVQ GLSAMGQMFR LTTLKDNTIA SSLQYANGQI TLNGQKMPLE
DFVGLFGMPA LSVPDVPALP QQ