Gene SeD_A1876 details

Gene Information

• Locus tag: SeD_A1876
• Symbol: manA
• ID: 6874866
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853
• Kingdom: Bacteria
• Replicon accession: NC_011205
• Strand: +
• Start bp: 1816134
• End bp: 1817309
• Gene Length: 1176 bp
• Protein Length: 391 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642785002
• Product: mannose-6-phosphate isomerase, class I
• Protein accession: YP_002215670
• Protein GI: 198245756
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1482] Phosphomannose isomerase
• TIGRFAM ID: [TIGR00218] mannose-6-phosphate isomerase, class I

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.335332
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 70
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAAAAAC TCATTAACTC AGTGCAAAAC TATGCCTGGG GAAGTAAAAC TGCGTTAACG 
GAACTTTATG GCATCGCCAA TCCGCAGCAG CAGCCAATGG CTGAACTCTG GATGGGCGCG 
CATCCCAAAA GCAGCTCGCG AATCACCACC GCCAACGGCG AAACCGTCTC CCTGCGTGAC 
GCCATCGAAA AGAATAAAAC CGCCATGCTG GGCGAAGCGG TAGCCAACCG TTTCGGCGAA 
CTGCCGTTTC TGTTTAAAGT ACTGTGCGCC GCGCAGCCGC TCTCTATTCA AGTGCACCCG 
AATAAGCGCA ATTCCGAAAT CGGTTTCGCG AAAGAAAATG CGGCGGGTAT CCCCATGGAT 
GCCGCAGAGC GGAACTATAA AGATCCTAAC CATAAACCAG AGCTGGTTTT TGCCCTGACG 
CCTTTCCTGG CGATGAACGC GTTCCGCGAA TTTTCTGACA TTGTCTCTTT ACTGCAACCT 
GTCGCCGGCG CGCATTCCGC TATCGCCCAC TTTTTGCAGG CGCCGAATGC TGAACGTCTG 
AGCCAGCTTT TCGCCAGCCT GTTGAATATG CAAGGCGAAG AAAAATCCCG CGCGTTAGCC 
GTACTCAAAG CGGCGCTTAA CAGCCAGCAA GGCGAACCGT GGCAAACGAT CCGCGTGATT 
TCAGAGTATT ATCCTGACGA CAGCGGGCTT TTCTCTCCTT TGTTGCTGAA TGTGGTCAAA 
CTGAATCCCG GCGAGGCGAT GTTCCTGTTT GCCGAAACGC CTCATGCTTA TCTGCAGGGC 
GTTGCGCTGG AAGTCATGGC GAACTCCGAT AACGTTCTGC GCGCTGGCCT TACGCCAAAA 
TATATCGACA TCCCTGAGCT GGTCGCGAAC GTGAAGTTCG AACCTAAACC TGCCGGCGAG 
TTGCTGACTG CCCCGGTGAA AAGCGGCGCG GAGCTGGACT TCCCAATTCC GGTTGACGAT 
TTTGCTTTTT CACTGCACGA CCTGGCGCTT CAGGAGACGA GCATCGGCCA ACACAGCGCC 
GCGATTCTGT TCTGCGTTGA GGGTGAGGCG GTGTTACGTA AAGATGAACA GCGTCTGGTA 
CTGAAGCCGG GTGAATCGGC CTTTATCGGC GCGGATGAGT CTCCGGTTAA CGCCAGCGGC 
ACAGGCCGTT TAGCGCGTGT TTATAACAAG CTGTAG 

 

Protein sequence

MQKLINSVQN YAWGSKTALT ELYGIANPQQ QPMAELWMGA HPKSSSRITT ANGETVSLRD 
AIEKNKTAML GEAVANRFGE LPFLFKVLCA AQPLSIQVHP NKRNSEIGFA KENAAGIPMD 
AAERNYKDPN HKPELVFALT PFLAMNAFRE FSDIVSLLQP VAGAHSAIAH FLQAPNAERL 
SQLFASLLNM QGEEKSRALA VLKAALNSQQ GEPWQTIRVI SEYYPDDSGL FSPLLLNVVK 
LNPGEAMFLF AETPHAYLQG VALEVMANSD NVLRAGLTPK YIDIPELVAN VKFEPKPAGE 
LLTAPVKSGA ELDFPIPVDD FAFSLHDLAL QETSIGQHSA AILFCVEGEA VLRKDEQRLV 
LKPGESAFIG ADESPVNASG TGRLARVYNK L