Gene SeD_A1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1873 
Symboltus 
ID6874538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1811791 
End bp1812720 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content53% 
IMG OID642784999 
ProductDNA replication terminus site-binding protein 
Protein accessionYP_002215667 
Protein GI198246062 
COG category 
COG ID 
TIGRFAM ID[TIGR02648] DNA replication terminus site-binding protein 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00330018 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCT ACGATCTCGT TGAACGCCTG AATGGCACTT TTCGCCAGAT AGAACAACAC 
CTGGCGGCGC TGACGGATAA TCTACAGCAG CATTCGCTAC TTATCGCCCG TGTCTTTTCA 
CTGCCGCAGG TGACCAAAGA GGCGGAACAT GCGCCGCTGG ATACTATCGA GGTAACGCAA 
CATCTGGGGA AAGAGGCCGA AACGCTGGCG CTACGTCACT ATCGCCATTT GTTTATTCAA 
CAGCAGTCCG AAAACCGCAG CAGTAAAGCC GCCGTCCGCC TGCCTGGCGT TTTATGCTAT 
CAAGTGGATA ATGCGACACA GCTAGATCTG GAAAATCAGG TACAGCGCAT TAACCAGTTG 
AAAACCACCT TCGAGCAGAT GGTTACGGTA GAGTCCGGTC TTCCCTCAGC GGCACGTTTT 
GAGTGGGTGC ATCGGCATCT ACCCGGCTTA ATTACGCTGA ACGCTTACCG CACGCTGACG 
CTTATCAATA ACCCCGCCAC CATACGTTTC GGTTGGGCAA ATAAACATAT TATTAAAAAT 
TTAAGCCGGG ATGAGGTTCT GAGCCAGTTG AAAAAAAGCC TCGCGTCGCC GCGCAGCGTC 
CCGCCGTGGA CGCGCGAACA ATGGCAATTC AAGCTGGAAC GGGAATATCA GGATATCGCT 
GCCTTACCGC AGCAGGCCCG ACTCAAGATT AAGCGTCCGG TTAAAGTACA GCCGATCGCC 
CGCATCTGGT ATAAAGGCCA GCAAAAACAG GTGCAACACG CCTGCCCCAC GCCGATTATC 
GCATTAATCA ACACGGACAA CGGCGCTGGC GTGCCGGATA TTGGCGGGCT GGAAAACTAT 
GACGCCGACA ATATTCAGCA CCGTTTTAAA CCACAGGCGC AGCCGCTGCG ACTGATTATT 
CCGCGACTGC ACCTGTATGT GGCGGATTAA
 
Protein sequence
MSRYDLVERL NGTFRQIEQH LAALTDNLQQ HSLLIARVFS LPQVTKEAEH APLDTIEVTQ 
HLGKEAETLA LRHYRHLFIQ QQSENRSSKA AVRLPGVLCY QVDNATQLDL ENQVQRINQL 
KTTFEQMVTV ESGLPSAARF EWVHRHLPGL ITLNAYRTLT LINNPATIRF GWANKHIIKN 
LSRDEVLSQL KKSLASPRSV PPWTREQWQF KLEREYQDIA ALPQQARLKI KRPVKVQPIA 
RIWYKGQQKQ VQHACPTPII ALINTDNGAG VPDIGGLENY DADNIQHRFK PQAQPLRLII 
PRLHLYVAD