Gene SeD_A1867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1867 
Symbol 
ID6872958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1806082 
End bp1806813 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content53% 
IMG OID642784994 
ProductDNA-binding transcriptional regulator RstA 
Protein accessionYP_002215662 
Protein GI198242934 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0435355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA TTGTATTTGT TGAAGACGAC GCTGAAGTGG GTTCTCTCAT TGCCGCTTAT 
CTGGCGAAAC ATGATATTGA TGTCATTGTT GAGCCGCGTG GTGACCGGGC GGAGGATCTT
ATCCTCACCA CTCAGCCCGA TCTGGTTTTA CTGGATATTA TGCTTCCAGG TAAAGATGGC
ATGACGATAT GTCGCGATTT ACGCCACCGC TGGCAAGGCC CGATTGTCCT GCTCACCTCG
CTGGACAGTG ATATGAATCA TATTCTGGCG CTGGAGATGG GCGCCTGCGA CTACATCCTC
AAAACCACGC CTCCGGCCGT TTTGCTGGCG CGTCTGCGCT TACACCTGCG GCAAAGCGAA
CAAACGCAAC AGGCAAAAAG TCTTCAGGAG AGCGCGCTTA CGCCGCATAA AGCGCTGCGT
TTTGGCGCGT TAACCATCGA TCCCCTTAAC CGGGCGGTCC AGCTCAATGG CGATTTCATA
TCGCTCTCCA CCGCCGATTT TGAATTGCTC TGGGAACTGG CGACACACGC CGGACAAATT
ATGGATCGCG ACGCGTTGCT AAAAACGCTG CGCGGCGTCA ATTATGATGG TCTGGATCGC
AGCGTGGATG TGGCGATTTC CCGCCTGCGT AAGAAACTGC TGGATAGCGC TGCTGAGCCC
TATCGTATAA AGACCATTCG CAATAAAGGC TATCTTTTTG CCCCTCATGC CTGGGACGAA
ACGACGGGAT AA
 
Protein sequence
MNRIVFVEDD AEVGSLIAAY LAKHDIDVIV EPRGDRAEDL ILTTQPDLVL LDIMLPGKDG 
MTICRDLRHR WQGPIVLLTS LDSDMNHILA LEMGACDYIL KTTPPAVLLA RLRLHLRQSE
QTQQAKSLQE SALTPHKALR FGALTIDPLN RAVQLNGDFI SLSTADFELL WELATHAGQI
MDRDALLKTL RGVNYDGLDR SVDVAISRLR KKLLDSAAEP YRIKTIRNKG YLFAPHAWDE
TTG