Gene SeD_A1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1860 
SymboltqsA 
ID6871598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1798267 
End bp1799301 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content50% 
IMG OID642784990 
Productputative transport protein 
Protein accessionYP_002215658 
Protein GI198243169 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC CGATCATCAC GCTCAATGGT CTAAAAATCG TCATTATGCT GGGAATGCTG 
GTGGTTATTC TGAGCGGTAT CCGCTTCGCC GCAGATATCA TTGTTCCCTT TATTTTGGCG
TTATTTATTG CGGTCGTTCT CAATCCCGTT GTGCAACGGA TGACCCGATG TCGAATTCCG
CGCGTTATCG CCGTGTCATT GCTCATTGTG ATTATTGTCA TGCTAATGGT ACTGCTACTG
GCCTATTTGG GGACATCATT AAATGAACTG GCCCGTACCC TACCGCAGTA TCGCTCCTCA
TTGGTGATAC CGTTGCAACG TATCGAACCG TGGTTGCAGC GAGCAGGCAT TGGCGTGTCG
GTTGATGAGC TGGCGAAATA TATCGATCCA AACGCCGCAA TGACTCTGGT AACGAACCTG
CTCACCCAGC TGTCCAATGC CATGTCGTCC ATCTTTTTAT TGTTATTGAC CGTGGTATTT
ATGCTGCTGG AGGTTCCACA ATTGCCTGAA AAACTGCAGC AGATGATGAG CCGTCCGGTG
GAGGGCATGG CGGCAATTCA ACGCGCGCTT GATAGCGTTT CCCATTATCT GGTGCTAAAA
ACAGCGATCA GTATCGTGAC GGGACTGGTC GCATGGGGAA TGCTGGCCGC GCTGGATGTC
CGCTTCGCCT TTGTCTGGGG ACTACTGGCC TTCGCGCTGA ACTATATTCC TAATATTGGA
TCGGTGCTCG CTGCCCTGCC GCCCATTATT CAGGTGCTGG TATTTAACGG GTTTTATGAT
GCGCTGCTGG TGCTGGCAGG CTATCTGCTG ATTAATCTGG TCTTCGGCAA TATCCTTGAG
CCACGAATCA TGGGACGTGG TTTAGGCCTT TCAACCTTAG TGGTATTTTT GTCGTTAATT
TTCTGGGGCT GGCTACTAGG TCCGGTGGGC ATGCTGCTCT CCGTTCCGTT AACCATCATT
GTCAAAATCG CCCTCGAACA GACCACCGGC GGACAGAGTA TCGCCGTTCT GCTTAGCGAT
TTAAACAAAA GATAA
 
Protein sequence
MAKPIITLNG LKIVIMLGML VVILSGIRFA ADIIVPFILA LFIAVVLNPV VQRMTRCRIP 
RVIAVSLLIV IIVMLMVLLL AYLGTSLNEL ARTLPQYRSS LVIPLQRIEP WLQRAGIGVS
VDELAKYIDP NAAMTLVTNL LTQLSNAMSS IFLLLLTVVF MLLEVPQLPE KLQQMMSRPV
EGMAAIQRAL DSVSHYLVLK TAISIVTGLV AWGMLAALDV RFAFVWGLLA FALNYIPNIG
SVLAALPPII QVLVFNGFYD ALLVLAGYLL INLVFGNILE PRIMGRGLGL STLVVFLSLI
FWGWLLGPVG MLLSVPLTII VKIALEQTTG GQSIAVLLSD LNKR