Gene SeD_A1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1856 
Symbol 
ID6872355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1796310 
End bp1797131 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content57% 
IMG OID642784986 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_002215654 
Protein GI198246128 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3591] V8-like Glu-specific endopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAAA CCATTGCTGT ATTACTGGGC ATAGTGTGTT TTTTACCGGT TATGGCGAAA 
GCCAGGGGGG CTGAAACAGA CGCCACGGAT GCCAGCGACG TCAAAACGCT TTTTTTTAAC
CATGATGATC GGGTGCCCGT CGCCGATCCT ACCCAATCGC CGTGGGATGC CATCGGGCAA
CTAGAGACCG CCAGCGGTAA TTTGTGTACG GCAACGCTTA TCTCCCCGCA TATCGCCCTG
ACAGCAGGTC ACTGCCTGCT AACGCCACCG AAAGGAAAAC CAGACAAGGC GGTTGCGCTG
CGTTTTGTGG CGCGAAAAGG AGTATGGCGC TATGAAATCC ACGGCATTGA AGGCCGCGTT
GAACCGTCGC TGGGCCGACG CCTGAAAGCG GATGGCGATG GCTGGATTGT GCCGCCTGCC
GCGGCAAGCT GGGATTTTGG TCTGGTAATA TTGCGCTACC CACCTTCCGG TATCACGCCA
GTGCCTTTAT TTACCGGCGA TAAAGCGGCG CTCACTGCGG CGTTGAAAGC CGCAGACCGA
AAAGTCACGC AGTCCGGTTA TCCGGAAGAT CATCTGAATG CGCTCTATTC CCATCAGGAT
TGCGTCGTGA CCGGCTGGGC GCAGAATGCC GTACTCTCAC ACCAGTGCGA CACGTTACCT
GGCGACAGCG GCTCGCCGCT CTTATTGCAC ACGGATAGCG GATGGCAGCT CATTGGCGTA
CAAAGCTCCG CCCCTGCGGC TAAAGATCGC TGGCGCGCCG ATAACCGCGC TATATCCGTC
ACCGGCTTTC GCGATAAGCT GAAAGCTCTG GCGCAGGATT AA
 
Protein sequence
MHKTIAVLLG IVCFLPVMAK ARGAETDATD ASDVKTLFFN HDDRVPVADP TQSPWDAIGQ 
LETASGNLCT ATLISPHIAL TAGHCLLTPP KGKPDKAVAL RFVARKGVWR YEIHGIEGRV
EPSLGRRLKA DGDGWIVPPA AASWDFGLVI LRYPPSGITP VPLFTGDKAA LTAALKAADR
KVTQSGYPED HLNALYSHQD CVVTGWAQNA VLSHQCDTLP GDSGSPLLLH TDSGWQLIGV
QSSAPAAKDR WRADNRAISV TGFRDKLKAL AQD