Gene SeD_A1849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1849 
Symbol 
ID6874329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1789748 
End bp1791001 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content58% 
IMG OID642784979 
Productputative voltage-gated ClC-type chloride channel ClcB 
Protein accessionYP_002215647 
Protein GI198246211 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGTC GCCTGCTGAT CGCTACGCTC ATCGGTATTC TCGCGGCGCT GGCTGTCGCC 
GCCTTCCGTC ATGCGATGCA ATTGCTGGAG TGGATTTTCC TGAGTAATGA CACCGGCAGT
CTGGTGAATG CGGCTGAGGG GCTTTCGCCC TGGCGACGGC TGATTACGCC AGCGCTTGGC
GGCCTGGCCG CTGGTCTGTT GCTGTGGGGG TGGCAAAAAA TGAACCAACA GCGCCCCCAT
GCGCCCACTG ACTATATGGA AGCATTGCAA ACCGACGGGC AATTTGACGT TGGCGCCAGT
CTGGTGAAAT CGCTGGCCTC GCTGCTGGTC GTGGTCAGCG GCAGCGCAAT TGGTCGCGAA
GGCGCAATGA TCCTCCTCGC CGCGCTGGCG GCATCCAGCT TTGCCCGACG CTTCACGCCG
CGTGAGGAAT GGAAATTATG GATCGCCAGC GGCGCCGCTG CGGGCATGGC GGGCGCTTAC
CATGCGCCGC TGGCGGGCAG CCTGTTTATC GCGGAAATCC TGTTCGGTAC CTTAATGCTG
GCTTCCCTCG GCCCGGTTGT CGTTTCCGCC GTCGTCGCCC TGCTAACCAC CCATCTATTA
AACGGTAGCG ATTCACTACT CTATACCGTA CATCTGACCG TTGATCTCCA CGCGCGGGAG
TACGTCATGA TAGTCAGTAC CGGCCTGGTC GCCGGTCTGT GCGGTCCATT ACTGATGTGG
CTGATGACGG CCAGCCATAA TAGTTTCTTA CGCTTAAAAC TGTCCCCGCC CTGGCAACTG
GCGTTGGGCG GGCTTATTGT CGGATTACTG TCGTTACTCA CGCCCACGGT ATGGGGAAAC
GGCTATAGCG TCGTACAATC ATTTTTGCTC TCTCCGCCGC TATTCTCGCT GATTGGCGGA
ATTTTTGCGT GCAAAATCCT GGCGGTGCTC GCCAGCAGCG GGTCTGGCGC GCCGGGCGGC
GTCTTTACGC CAACATTATT TGTCGGATTA TCAATTGGAA TGTTTCTGGG TCGGATATGG
GGATTCTGGC TGCCAGGCTC GGATGAAATA GCGATTTTAT TGGGGCTGGC GGGTATGGCG
ACGCTACTGG CGGCGACAAC CCATGCGCCG ATAATGTCCA CCCTGATGAT TTGTGAAATG
ACCGGCGAGT ATCAGTTACT CCCCGGTCTG CTGATTGCCT GTGTAGTCGC GTCAGTGCTC
TCGCGAACGT TACGCCATGA TTCTATCTAC CGCCAGCACG CTGCCGAGCA TTGA
 
Protein sequence
MFRRLLIATL IGILAALAVA AFRHAMQLLE WIFLSNDTGS LVNAAEGLSP WRRLITPALG 
GLAAGLLLWG WQKMNQQRPH APTDYMEALQ TDGQFDVGAS LVKSLASLLV VVSGSAIGRE
GAMILLAALA ASSFARRFTP REEWKLWIAS GAAAGMAGAY HAPLAGSLFI AEILFGTLML
ASLGPVVVSA VVALLTTHLL NGSDSLLYTV HLTVDLHARE YVMIVSTGLV AGLCGPLLMW
LMTASHNSFL RLKLSPPWQL ALGGLIVGLL SLLTPTVWGN GYSVVQSFLL SPPLFSLIGG
IFACKILAVL ASSGSGAPGG VFTPTLFVGL SIGMFLGRIW GFWLPGSDEI AILLGLAGMA
TLLAATTHAP IMSTLMICEM TGEYQLLPGL LIACVVASVL SRTLRHDSIY RQHAAEH