Gene SeD_A1844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1844 
Symbol 
ID6873148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1785211 
End bp1785825 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content54% 
IMG OID642784974 
Producttwin-argninine leader-binding protein DmsD 
Protein accessionYP_002215642 
Protein GI198245085 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.487956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTT TTTTACAACG TGATGATTTT TCAGTAACGG CGCGTGTTCT TGGCGCGTTG 
TTTTATTATT CGCCGGAAAG CCACGAAACC GCTCCTCTGG TTCAGGCGCT ATTAACCGAC
GACTGGCAGG CGCAGTGGCC GCTTGATGCC GAGGCGCTTG CGCCTGTGGC GGCTATGTTT
AAGACCCACA GCGAAGAGTC GTTGCCACAG GCCTGGCAGC GTCTGTTTAT CGGCCCTTAC
GCTCTGCCGT CTCCGCCGTG GGGTTCCGTC TGGCTGGATC GTGAGAGCGT ATTATTTGGC
GATTCTACGC TGGCGCTACG TCAGTGGATG CGCGAAAACG GAATTCAGTT TGAAATGCAA
CAAAACGAGC CAGAAGATCA TTTTGGGTCG CTGTTGCTGC TGGCGGCCTG GCTTGCCGAG
AATGATCGTC ATCATGAATG CGAACAACTC CTGGCCTGGC ATCTGTTTCC GTGGTCGTCC
CGCTTTCTGG ACGTATTTAT CGATCATGCC GGGCATCCGT TTTATCAGGC GTTGGGGCAA
CTGGCGCGTC TGACTCTGGC GCAATGGCAA GCTCAACTTA TTATTCCCGT CGCTGTAAAA
CCGTTATTCC GTTAA
 
Protein sequence
MTTFLQRDDF SVTARVLGAL FYYSPESHET APLVQALLTD DWQAQWPLDA EALAPVAAMF 
KTHSEESLPQ AWQRLFIGPY ALPSPPWGSV WLDRESVLFG DSTLALRQWM RENGIQFEMQ
QNEPEDHFGS LLLLAAWLAE NDRHHECEQL LAWHLFPWSS RFLDVFIDHA GHPFYQALGQ
LARLTLAQWQ AQLIIPVAVK PLFR