Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1813 |
Symbol | |
ID | 6875722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 1759161 |
End bp | 1760351 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642784947 |
Product | sugar efflux transporter |
Protein accession | YP_002215615 |
Protein GI | 198244324 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 98 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATCA ATCCAGTTTC CCGCAAGGTC GCGTGGCTAC GGGTAGTTAC GCTTGCTATT GCCGCTTTTA TTTTCAATAC CACAGAATTT GTGCCGGTTG GTTTGCTATC AGACATTGCT GAAAGCTTTC ATATGCAAAC CGCGCAGGTC GGCATCATGC TAACCATTTA CGCCTGGGTA GTTGCCGTCA TGTCGCTGCC TTTTATGCTT CTTACCAGTC AAATGGAGCG CCGTAAACTA CTAATTTGTC TGTTTGTTTT GTTTATTGCC AGCCATGTGC TCTCCTTTCT GGCATGGAAC TTTACCGTGC TGGTCATTAG CCGTATTGGT ATCGCTTTCG CCCACGCTAT TTTCTGGTCG ATAACCGCCT CGCTGGCGAT CCGCCTGGCC CCTGCCGGGA AACGCGCGCA GGCATTAAGT CTGATAGCGA CCGGCACCGC GTTGGCCATG GTGCTTGGGC TGCCGATAGG TCGCGTTGTT GGTCAGTATT TTGGCTGGCG CACCACCTTT TTTGCCATCG GCATGGGCGC ATTAATTACG CTGCTATGTC TGATTAAGCT TCTACCGAAA TTGCCGAGCG AGCATTCCGG CTCACTAAAA AGTTTACCTT TGCTATTCCG GCGCCCGGCG CTGATGAGCC TCTATGTGCT GACCGTCGTT GTGGTGACTG CGCATTACAC AGCTTATAGC TATATTGAAC CGTTCGTTCA GAATGTCGCC GGGCTCAGTG CGAATTTTGC TACCGTCCTG TTACTGATCC TCGGCGGCGC CGGGATCATC GGCAGCCTCG TGTTTGGTAA ACTGGGTAAT CGCCATGCCT CGTCGCTCGT CAGTATCGCT ATTGCCCTGC TGGTTGTCTG TCTGCTTCTG CTGCTGCCTG CGGCGGATAG CGAAGCGCAT CTGGCCATAC TGAGCATTTT CTGGGGCATC GCGATTATGG TGATAGGGCT CGGTATGCAG GTGAAAGTAC TGGCGCTGGC CCCGGACGCG ACCGATGTCG CAATGGCGCT ATTTTCAGGC ATCTTTAATA TTGGTATTGG CGCTGGCGCG CTGGTAGGCA ATCAGGTGAG TTTGCACTGG TCAATGTCGG CCATCGGCTA TATTGGCGCC ATACCCGCCT GTGCCGCGCT GGTATGGGCT GTGCTCATAT TCCGCAAATG GCCAGTGACG CTGGAAGAAC AACCGCATTA A
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Protein sequence | MTINPVSRKV AWLRVVTLAI AAFIFNTTEF VPVGLLSDIA ESFHMQTAQV GIMLTIYAWV VAVMSLPFML LTSQMERRKL LICLFVLFIA SHVLSFLAWN FTVLVISRIG IAFAHAIFWS ITASLAIRLA PAGKRAQALS LIATGTALAM VLGLPIGRVV GQYFGWRTTF FAIGMGALIT LLCLIKLLPK LPSEHSGSLK SLPLLFRRPA LMSLYVLTVV VVTAHYTAYS YIEPFVQNVA GLSANFATVL LLILGGAGII GSLVFGKLGN RHASSLVSIA IALLVVCLLL LLPAADSEAH LAILSIFWGI AIMVIGLGMQ VKVLALAPDA TDVAMALFSG IFNIGIGAGA LVGNQVSLHW SMSAIGYIGA IPACAALVWA VLIFRKWPVT LEEQPH
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