Gene SeD_A1807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1807 
Symbol 
ID6874367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1753573 
End bp1754100 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content49% 
IMG OID642784942 
Productputative outer membrane protein 
Protein accessionYP_002215610 
Protein GI198242512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0346895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAA CGTCACTATT GTTTTCGGCC GCCGCGATAA CGTTAACTCT GATGGTGTCA 
TCGGCATCAG CGGCAACGCC AACCGCCGCA CAAAATGAAG CTACGTCGAC CGTTAAACAA 
GAAATTACAG AAGGCATTAA CCGTTACCTT TATTCAATAG ATAAGGCAGA CCCAACGTTA 
GGCAAGCAGC TCTTTTATGT TTCACCGGAA ACCAGTTTTA TTCATCCACG CGGTCACGAA 
CGCGGATGGT CGCAGATCGC TGAAAATTTT TATGGCACCA CTATGGGTAA AACTTTCAGT 
AAACGCACAT TAAAACTGGA CGCTCCCCCT GCTATTCATG TGTATGGCAA TGCCGCCGTT 
GCAGAGTTCG ACTGGCATTT TACCGCGGTA CGCCGTGATA ATGGGCAGAC TCAACACACG 
ACAGGCCGCG AAAGCCAGGT GTGGGCGAAG ATACCAAACA CAGGATGGCG AATCGTTCAT 
GTCCACTACT CCGGTCCAGC CAAAACCGGC GTTGGAGAAG GCTATTAA
 
Protein sequence
MQKTSLLFSA AAITLTLMVS SASAATPTAA QNEATSTVKQ EITEGINRYL YSIDKADPTL 
GKQLFYVSPE TSFIHPRGHE RGWSQIAENF YGTTMGKTFS KRTLKLDAPP AIHVYGNAAV 
AEFDWHFTAV RRDNGQTQHT TGRESQVWAK IPNTGWRIVH VHYSGPAKTG VGEGY