Gene SeD_A1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1805 
SymbolhypA 
ID6875436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1751241 
End bp1751582 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content50% 
IMG OID642784940 
Producthydrogenase nickel insertion protein HypA 
Protein accessionYP_002215608 
Protein GI198244041 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0274215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAT TAGCCCTGGC GCAAAATATT ATCGAATTGC TGGAGGAACA GGCAGTAAAT 
CACCAGTTCA GCAAGGTAAA GCAAGTCTGG CTGGAGATTG GCGTTATGGC CTGTGTTGAG
GTGCCGGCGC TGCATTTTGG CCTGGACGTC GCCGCTCGTC ATACCCTTGC TGACAATGCG
CGTTTCCACA TTACTATCGC ACCGGCGCAA GGTTGGTGTC TGTCCTGTAA TCAACCCTTC
ACCTCTCAAA CATCCACACT CTGTTGTCCC TTTTGTCATT CAGGCAAAGT GCAGATAGAT
GACAGTAGCA GAATGCGCAT TCGCGAGATC GAAGTCGAAT AG
 
Protein sequence
MHELALAQNI IELLEEQAVN HQFSKVKQVW LEIGVMACVE VPALHFGLDV AARHTLADNA 
RFHITIAPAQ GWCLSCNQPF TSQTSTLCCP FCHSGKVQID DSSRMRIREI EVE