Gene SeD_A1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1801 
SymbolhypC 
ID6874195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1748568 
End bp1748867 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content56% 
IMG OID642784936 
Producthydrogenase assembly chaperone HypC/HupF 
Protein accessionYP_002215604 
Protein GI198243250 
COG category 
COG ID 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.102221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones96 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTATCG GCGTTCCTGT GCAGGTTATT TCACCCGGTC AGTGGTTCGC CAAATGCCGC 
GACCGACACG GCGAGCTTAT CGACGTTGAT ATTCGGCTTG TGGCTCCCCC CTTAGCAGGC 
GCATGGCTGC TGACATTTGG CGGCGCAGCA CGACGAGAAA TGGACGAAGC GGAAGCCGCT 
GAGGTACTGG CGGCGCTGGA CTCACTGGAA CAGGCCATGC TCACGCAAAG CGATCCGCTG 
ACCGGTTTTG CCGATTTATT GTCTCGCACG CCTGAATTAC CGGAGCATTT AAAAAAATGA
 
Protein sequence
MCIGVPVQVI SPGQWFAKCR DRHGELIDVD IRLVAPPLAG AWLLTFGGAA RREMDEAEAA 
EVLAALDSLE QAMLTQSDPL TGFADLLSRT PELPEHLKK