| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1798 |
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| Symbol | |
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| ID | 6875260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1745458 |
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| End bp | 1747260 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642784933 |
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| Product | [Ni/Fe] hydrogenase, large subunit |
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| Protein accession | YP_002215601 |
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| Protein GI | 198244043 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.570579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATATC CTTATCAGAC TCAGGGTTTT ACGCTGGACA ATAGCGGACG GCGAATTGTG
GTCGATCCGG TTACTCGCAT CGAAGGGCAT ATGCGTTGCG AAGTGAATAT CGACAGTAAT
AATGTCATTA CTAACGCCGT GTCGACCGGC ACCATGTGGC GCGGCCTGGA GGTTATCCTG
AAAGGTCGCG ATCCGCGAGA CGCCTGGGCA TTTGTTGAAC GCATTTGCGG CGTCTGCACC
GGTACACACG CTCTGACCTC AATCCGTGCC GTAGAAAATG CGCTGGGAAT CGCGATTCCG
GACAACGCAA ACTGTATCCG TAATATGATG CAGGCTACGC TACACGTTCA CGATCACCTG
GTGCATTTTT ATCATCTGCA CGCGCTGGAC TGGGTTGATG TGGTTGCCGC CCTGAAAGCC
GACCCGCATC AGACCTCCGC CATCGCGCAA AGCCTTTCCG CATGGCCGCT ATCCTCGCCG
GGATATTTCC GCGATTTGCA AAATCGACTG AAGCGGTTTA TCGAGTCCGG TCAACTTGGC
CCTTTCCGTA ATGGCTACTG GGGACATCCG GCGATGAAAC TTCCGCCGGA AGCCAATTTG
CTGGCGGTCG CCCACTATCT TGAAGCGCTC GATTTTCAAA AAGAGATCGT AAAAATTCAC
ACCGTTTTCG GTGGTAAAAA CCCGCATCCT AACTGGCTGG TGGGCGGCGT TCCTTGCGCC
ATCAACCTTG ACGAAACGGG CGCGGTCGGC GCAGTGAATA TGGAACGCCT GAACCTTGTC
AGTTCCATCA TCCAAAAAGC TCGCCAGTTC TGCGAACAGG TTTATCTTCC GGACGTCTTG
CTGATTGCCA GTTATTACAA AGACTGGGCA AAAATCGGCG GCGGGTTATC GAGCATGAAC
CTGCTGGCTT ATGGCGAGTT TCCGGATAAC CCTAACGATT ATTCCGCCAG TAATCTTCTG
CTTCCGCGTG GGGCTATCAT TAACGGTCGT TTCGACGAAA TTCATCCTGT CGATTTAACC
GCCCCCGATG AGATTCAGGA GTTTGTCACT CACTCCTGGT ATACCTATGG TAACGGCAAT
AACGATAAGG GCCTGCATCC CTGGGATGGT CTGACCGAAC CGCAACTGGT CATGGGCGAA
CACTATAAAG GCACAAAAAC TTTTATCGAA CAGGTGGATG AGTCCGCTAA ATATTCATGG
ATTAAATCGC CGCGCTGGAA GGGACATGCG ATGGAGGTAG GTCCGCTGGC GCGTTATCTG
ATTGGATATC ATCAAAATAA ACCGGAATTT AAAGAGCCCG TGGATCAACT GCTGAGTGTA
TTAAAGCTGC CTAAAGAAGC GCTCTTTTCT ACATTAGGAC GTACTGCCGC GCGTGCGCTG
GAATCCGTAT GGGCAGGCAA TACGCTGCAA TATTTCTTCG ATCGTCTGAT GCGTAACCTC
AAGTCCGGCG ATACGGCGAC GGCAAACGTC ACGCTCTGGG AACCCGATAC CTGGCCTACA
TCGGCAAAAG GCGTTGGTTT CAGCGAGGCG CCGCGTGGCG CGCTGGGGCA CTGGATAAAA
ATTGAAAATC AGAAAATCGA CAGCTATCAG TGTGTGGTAC CGACAACCTG GAATGCCGGG
CCACGTGACG ATAAAGGTCA AATTGGCGCG TACGAAGCGG CGTTAATGGG GACTAAACTC
GCCGTTCCCG ATCAACCATT GGAGATTTTA CGTACTCTGC ACAGCTTCGA TCCCTGCCTG
GCCTGCTCCA CCCATGTTAT TGATAATCAT GGAGGGGAGC TGGTCAGGGT TCAGGTACGA
TGA
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| Protein sequence | MAYPYQTQGF TLDNSGRRIV VDPVTRIEGH MRCEVNIDSN NVITNAVSTG TMWRGLEVIL
KGRDPRDAWA FVERICGVCT GTHALTSIRA VENALGIAIP DNANCIRNMM QATLHVHDHL
VHFYHLHALD WVDVVAALKA DPHQTSAIAQ SLSAWPLSSP GYFRDLQNRL KRFIESGQLG
PFRNGYWGHP AMKLPPEANL LAVAHYLEAL DFQKEIVKIH TVFGGKNPHP NWLVGGVPCA
INLDETGAVG AVNMERLNLV SSIIQKARQF CEQVYLPDVL LIASYYKDWA KIGGGLSSMN
LLAYGEFPDN PNDYSASNLL LPRGAIINGR FDEIHPVDLT APDEIQEFVT HSWYTYGNGN
NDKGLHPWDG LTEPQLVMGE HYKGTKTFIE QVDESAKYSW IKSPRWKGHA MEVGPLARYL
IGYHQNKPEF KEPVDQLLSV LKLPKEALFS TLGRTAARAL ESVWAGNTLQ YFFDRLMRNL
KSGDTATANV TLWEPDTWPT SAKGVGFSEA PRGALGHWIK IENQKIDSYQ CVVPTTWNAG
PRDDKGQIGA YEAALMGTKL AVPDQPLEIL RTLHSFDPCL ACSTHVIDNH GGELVRVQVR
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