Gene SeD_A1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1794 
Symbol 
ID6873742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1740912 
End bp1741937 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content48% 
IMG OID642784929 
Productzinc-type alcohol dehydrogenase 
Protein accessionYP_002215597 
Protein GI198243160 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCA AAGCTGTGTT CATTAATAAG CCTGGTGAAG TTGAAACCCG CTGGGTGGAT 
TATCCCCATA AGAAAGAAAA TGAAGTATTA ATTAAGGTTG ATGCTGCAGG CATTTGCGGA
TCGGATATCG GGGCTTTTCG TGGAACGAAC CCACTGGTTA CTTACCCAAG AATTATTGGG
CATGAAGTGA CCGGAATTGT TCTTCAGGAA GGCGCCGGAA TGCCGGACAA TATTAAAGAA
GGTGACCGCG TAATTGTTGA CCCCTATATT TATTGTGGTC ACTGCTACCC TTGCTCTGTC
GGCAGAACTA ATTGTTGTGA AAATTTAAAC GTCATTGGCG TGCATGTCGA TGGCGCAATG
CAGGAGGTGG TTACTCATCC CGCACATTTA ATTCATAAAA TACCAGATAA TGTGCCTTCT
GAAATGGCGC CGCTGGCAGA ACCGCTGACC ATCGCTCTGC ACGCGCTGCA TCGGGCAAAC
GTTAAGGCTG GGGAATATGT TGCCATCATC GGCGCGGGGG CCATTGGTCT TATGGCGGCA
TTAAGCGCGC GTCATTACAA GGCAACGCCT ATTCTGATCG ATATTGTGGA AGAAAGGCTA
CGCTATGCGC AAAAGCTTGG CGTTCCTTAT GTGCTGAACG CCGCTGACGA TCAGGTTATC
GACGCTATTA AAAATATCAC CCACGGCACC ATGGCGCAGG TCGTGATAGA AGCTTCCGGC
GCAAATAGCG CTATTCGAAA TACGCTTGAT TTAGCATCGT TTGCTGGTCG TATTTCGTTT
ACCGGATGGC CAAAACAGGA AACGTCGCTG CCGACGAACC TGATCACCTA TAAAGAACTG
GATTTACGCG GTTCCCGCAC CAGTGCCGGT GAATTTGATG AGGCATTACG CATGCTGTCA
ACGCTGGAGA TTAATCCGCA AGATGTTGTC AGTAAGGTCG TCAATCTTGA TGAGATCCCT
GATGCAGTTA AAGAACTTGA TCGCTATCCG GAGCGCTACT TAAAGATTAA TGCTGTTTTC
CATTGA
 
Protein sequence
MKVKAVFINK PGEVETRWVD YPHKKENEVL IKVDAAGICG SDIGAFRGTN PLVTYPRIIG 
HEVTGIVLQE GAGMPDNIKE GDRVIVDPYI YCGHCYPCSV GRTNCCENLN VIGVHVDGAM
QEVVTHPAHL IHKIPDNVPS EMAPLAEPLT IALHALHRAN VKAGEYVAII GAGAIGLMAA
LSARHYKATP ILIDIVEERL RYAQKLGVPY VLNAADDQVI DAIKNITHGT MAQVVIEASG
ANSAIRNTLD LASFAGRISF TGWPKQETSL PTNLITYKEL DLRGSRTSAG EFDEALRMLS
TLEINPQDVV SKVVNLDEIP DAVKELDRYP ERYLKINAVF H