Gene SeD_A1788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1788 
Symbol 
ID6874280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1735388 
End bp1736395 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content54% 
IMG OID642784923 
ProductHTH-type transcriptional regulator GalR 
Protein accessionYP_002215591 
Protein GI198244369 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACAA TAAAGGATGT TGCATCCATG GCCGGTGTAT CAACCGCGAC TGTATCACGC 
GTCATTAACC AGACCGCGTG GGTTGAACCC GTCACGCGCG AACGTGTAGA GAAAGCCATG 
CGCGATCTCA ATTATCGCCG GAATGCCGCC GCTATCGCGC TGGCGAAACG TAGCGGCGAT 
ATGCTCGGAT TGTTAACCGG CAATCTGGCC GATCCTTTTT TTGCCCGCCT TGCTCGCGGC 
GTAGAAGATG TTTCTCGTAA GCAGCAGTAT CGCTTGATGG TATGTAGCGG CGGCCACGAC 
GAAGAAATGG AAAAAGCGGG ACTGGATTTT CTGGTTAATC AAGGCTGTGA GGCTATTGTT 
GTACACGCCA GCCGATTACC GGATAAAGAG CTGCTGCGCT ACGCAGCCCA CTTTCCAGCG 
CTGGTTGTTG TTAATCGTTA TATCGCCGGT ATGGCCAACC GGTGTATCTG GCTGGAAAAT 
CGCAGCGCCG CCAGGGAAGC GACCCGATAT CTCCTGGCGA ACGGGCATCG GCGCATCGCC 
TGTGTGACAT CTGACTTGCC AATTATCGAT CGTCAGGAAC GCCTTGATGG TTACCGTCAG 
GCGCTGGAAG AATATGGTAT TTCTCCAGAC CCTCGCTGGG TGATTAGCGT TCCGTTTAAC 
GAAGAAGGCG GCGAGCGGGC CGCGCATCAA CTTATTAATA GCGGGCTTCC CCTTACGGCA 
GCGGTCACGT TTAACGATGT GATGGCCGCT GGCATTATGC GTATTCTTCA TCAACGCGGC 
GTTCAGCTTC CGCAACAGCT CTCTATTGTC GGCTTTGATG ATGTGGTGCT GGCCCGGTAT 
CTTTATCCGG CGTTAACAAC AATGCATTAT CCGGTCGAAC AAATGGCGCG TTGTGCCGCG 
CAACTGGCGA TACAGTTATA CCAGGGCATT ACGCCGCCGC CCAGCAGCAA TCATTTCAAT 
GCCGAACTGG TGATCCGCGA TTCTGTCGCG CCCTATTTTT CACGATGA
 
Protein sequence
MATIKDVASM AGVSTATVSR VINQTAWVEP VTRERVEKAM RDLNYRRNAA AIALAKRSGD 
MLGLLTGNLA DPFFARLARG VEDVSRKQQY RLMVCSGGHD EEMEKAGLDF LVNQGCEAIV 
VHASRLPDKE LLRYAAHFPA LVVVNRYIAG MANRCIWLEN RSAAREATRY LLANGHRRIA 
CVTSDLPIID RQERLDGYRQ ALEEYGISPD PRWVISVPFN EEGGERAAHQ LINSGLPLTA 
AVTFNDVMAA GIMRILHQRG VQLPQQLSIV GFDDVVLARY LYPALTTMHY PVEQMARCAA 
QLAIQLYQGI TPPPSSNHFN AELVIRDSVA PYFSR