| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1783 |
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| Symbol | treZ |
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| ID | 6872701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1726024 |
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| End bp | 1727808 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642784918 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_002215586 |
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| Protein GI | 198244502 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.625431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCAA AAATTTTTTG CAAAAGCTGG GGGGCTGAAT ATATCGCCGC TGATGTTGTC
CGCTTTCGTC TTTGGGCCAC CGGTCAGCAA AAGGTTATGC TCAGGCTTGC GGGTAAAGAC
CAGGAAATGC AGGCGAGCGG TGACGGCTGG TTTACGCTGG ACGTCTCCGG GGTGACGCCA
GGTACGGAGT ATAACTTTGT ACTCAACGAT GGCATGGTGG TCCCCGATCC GGCTTCCCGC
GCCCAAAAAA CTGACGTCAA CGGTCCGTCA TATGTGGTTG ATCCAGGCAG CTACACGTGG
CGCAACACCG GGTGGAAAGG TAGCCGTTGG GAGCAGGCCG TGGTGTATGA GATGCATACA
GGCACGTTCA CTCCGGAAGG CACCTTCCGC GCCGCAATAG CGAAGCTGCC TTATCTCGCT
GAACTCGGCG TTACCGTTAT TGAAGTGATG CCCGTTGCGC AATTTGGCGG CGAGCGTGGC
TGGGGCTATG ACGGCGTACT GCTTTACGCG CCGCATTCTG CCTATGGGAC GCCGGATGAT
TTCAAGGCGT TTATTGACGC CGCGCATGGG TATGGTCTTT CCGTCGTCCT GGATATTGTG
CTGAACCATT TCGGCCCGGA GGGAAATTAT TTACCGCTAT TGGCGCCGGC GTTTTTCCAC
AAAGAGCGCA TGACGCCGTG GGGAAATGGT ATCGCCTATG ATGTCGACGC CGTGCGGCGC
TATATCATCG AGGCGCCGTT ATACTGGCTG ACAGAATACC ATCTCGACGG CTTACGCTTT
GACGCTATCG ATCAGATTGA GGACAGTAGC GCCAGGCATG TGCTGGTTGA AATCGCACAA
CGTATTCGGG AAGACATTAC CGACAGACCC ATTCATCTGA CTACCGAAGA TAGCCGCAAT
ATTATTTCTC TGCATCCCCG TGATCAGGAT GGCAATGCGC CGCTGTTTAC CGCCGAATGG
AATGACGATT TTCATAATGC CGTCCACGTT TTTGCGACCG GAGAGACCCA GGCCTACTAC
AACGATTTTG CTGATACCCC GGAAAAACAC CTCGCGAGAG CGCTGGCCGA AGGATTCGCT
TATCAGGGAG AAATTTCCCC CCAAACCGGC GAACCTCGCG GCGTAAAAAG TACCGGACAA
CCTCCGGTCG CCTTTGTGGA TTTTATTCAG AACCACGATC AGGTCGGTAA CCGCGCCCAG
GGCGACAGAC TGATAACCCT GGCGGGCGCT GAACGAACAA AAGTATTGCT CGCCACGTTG
CTGCTTTCAC CGCATATTCC GCTGCTTTTT ATGGGCGAAG AGTATGGCGA AAGCCGTCCT
TTTCTTTTTT TTACCGATTT CCATGGGGAT TTAGCCCGCG CCGTTCGTGA AGGTCGCGCA
AAAGAGTTTG CCGATCATGC AGGGGAAAAT GTTCCGGACC CGAATGCGCC AGAGACCTTT
CAACGCTCAA AACTTAACTG GAAGCAACAG CACAGTGAAG AGGGTAAAGC GTGGCTGGCA
TTTACCCGCG AACTACTGCT TTTGCGCCAG AAGCATATCG TGCCGCTGTT GTCCGCTGCC
CGTGAGAGCT CAGGAACGGT ATTGCAAACC GCGCCCGGGT TTATTGCCGT TAGCTGGCGT
TTTCCGGGAG GAACGCTGTC ACTGGCGCTG AATATTAGCG CCACGACGGT ATTGCTGCCC
GATTTACCGG GTAAGACCCT CTTCGCCTGG CCGAATGAAT CCACCGGGTC GCTTTCCCAA
CATTCTCTTA TTGTCCGCTT AGCCCAGGGA GAGTCTGCAT CATGA
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| Protein sequence | MSSKIFCKSW GAEYIAADVV RFRLWATGQQ KVMLRLAGKD QEMQASGDGW FTLDVSGVTP
GTEYNFVLND GMVVPDPASR AQKTDVNGPS YVVDPGSYTW RNTGWKGSRW EQAVVYEMHT
GTFTPEGTFR AAIAKLPYLA ELGVTVIEVM PVAQFGGERG WGYDGVLLYA PHSAYGTPDD
FKAFIDAAHG YGLSVVLDIV LNHFGPEGNY LPLLAPAFFH KERMTPWGNG IAYDVDAVRR
YIIEAPLYWL TEYHLDGLRF DAIDQIEDSS ARHVLVEIAQ RIREDITDRP IHLTTEDSRN
IISLHPRDQD GNAPLFTAEW NDDFHNAVHV FATGETQAYY NDFADTPEKH LARALAEGFA
YQGEISPQTG EPRGVKSTGQ PPVAFVDFIQ NHDQVGNRAQ GDRLITLAGA ERTKVLLATL
LLSPHIPLLF MGEEYGESRP FLFFTDFHGD LARAVREGRA KEFADHAGEN VPDPNAPETF
QRSKLNWKQQ HSEEGKAWLA FTRELLLLRQ KHIVPLLSAA RESSGTVLQT APGFIAVSWR
FPGGTLSLAL NISATTVLLP DLPGKTLFAW PNESTGSLSQ HSLIVRLAQG ESAS
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