Gene SeD_A1775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1775 
Symbol 
ID6875059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1718978 
End bp1719634 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content48% 
IMG OID642784910 
Productformate dehydrogenase-N subunit gamma 
Protein accessionYP_002215578 
Protein GI198245467 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID[TIGR01583] formate dehydrogenase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGT CGAAAATGAT TGTGCGCACG AAATTTGTCG ACCGCGCCTG TCACTGGACG 
GTGGTGATCT GCTTCTTCCT GGTAGCGCTG TCGGGAATTT CGTTTTTCTT CCCGACGCTA
CAATGGTTGA CGCAAACTTT CGGCACGCCG CAGATGGGAC GTATTTTGCA CCCGTTCTTC
GGTATTGCCA TCTTCATCGC GCTGATGTTT ATGTTCGTGC GTTTCGTCCA CCACAACATC
CCGGATAAAA AAGATATTCC GTGGCTGAAA AATATTGTCG AAGTATTGAA AGGCAATGAG
CATAAGGTGG CGGATGTCGG CAAATACAAT GCCGGACAGA AGATGATGTT CTGGTCCATT
ATGAGCATGA TTTTTGTGCT GCTGGTGACT GGCGTGATTA TCTGGCGTCC GTATTTCGCG
CAGTATTTCC CCATGCAGGT GGTGCGTTAT AGCCTGTTAA TTCATGCGGC GGCGGGCATT
ATTTTAATGC ACGCGATCCT CATCCATATG TATATGGCAT TTTGGGTGAA AGGCTCGATT
AAAGGCATGA TCGAAGGGAA GGTCAGCCGT CGCTGGGCGA AGAAACATCA TCCACGCTGG
TATCGTGAAA TCGAGAAGGC GGAAGCAAAA AAAGAGAGCG AAGAAGGTAT TCAGTAA
 
Protein sequence
MSKSKMIVRT KFVDRACHWT VVICFFLVAL SGISFFFPTL QWLTQTFGTP QMGRILHPFF 
GIAIFIALMF MFVRFVHHNI PDKKDIPWLK NIVEVLKGNE HKVADVGKYN AGQKMMFWSI
MSMIFVLLVT GVIIWRPYFA QYFPMQVVRY SLLIHAAAGI ILMHAILIHM YMAFWVKGSI
KGMIEGKVSR RWAKKHHPRW YREIEKAEAK KESEEGIQ