Gene SeD_A1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1752 
Symbol 
ID6874430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1690409 
End bp1691446 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content54% 
IMG OID642784889 
Productputative NADP-dependent oxidoreductase yncb 
Protein accessionYP_002215557 
Protein GI198243259 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.9636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAC AGACCAACCG AAATCGTCGT TGGGTTTTGG CCTCGCGTCC CCACGGCGCG 
CCGCAGATGG ATAACTTCCG CCTCGAAGAA GATGACGTCG CGACGCCCGG TGAAGGGCAG
GTGCTATTGC GTACCGTTTT TTTATCACTC GACCCTTATA TGCGTGGCCG CATGAGCGAT
GAACCCTCAT ATGCGCCGCC TGTTGAACCT GGCTGCGTTA TGGTTGGCGG TACGGTCAGT
CGCGTTGTCG CGTCAAACCA TCCTGATTAC CGACCAGACG AATGGGTGTT GAGTTACAAT
GGCTGGCAGG ATTATGACAT TTCAGATGGC GAAGGGTTAG TAAAGCTGGG TGATAATCCG
CAACATCCTT CCTGGTCATT GGGTATTTTA GGAATGCCGG GGTTTACCGC CTATATGGGG
TTACTGGATA TCGGCCAGCC GAAAGAGGGC GAAACGCTGG TTGTCGCCGC CGCCACCGGC
CCCGTAGGCG CAACGGTTGG GCAAATTGGT AAGCTGAAGG GCTGCCGGGT CGTGGGTATT
GCTGGCGGCG CGGAAAAATG CCGTCATGCG ACAGACGTTT TGGGATTTGA TCTGTGCCTT
GATCATCACG CTGATAATTT CCCACAACAG CTTGCGCAGG CCTGCCCGCA GGGTATCGAT
ATCTATTATG AGAATGTCGG TGGTAAAGTC TTTGACGCCG TCTTACCGCT ACTGAATACG
TCGGCGCGGA TTCCGCTCTG CGGTCTGGTC AGCGGCTACA ATGCGACAGC GTTGCCGGAC
GGTCCAGACA GACTGCCTCT GCTGATGGCG ACATTACTTA AAAAGCGTAT TCGTCTGCAA
GGTTTTATCA TCAACCAGGA CTATGGTCAC CGGATACATG AGTTTCAGCA AGAAATGGGG
CGTTGGATCA AAGAAGGGAA AATACATTAC CGGGAGCAGA TTACTGATGG GCTGGAAAAT
GCGCCAGAAG CGTTTATGGG GCTGCTGGCG GGGAAGAACT TTGGCAAAGT CGTGATACGT
TTAGCGGACG ATGCGTAA
 
Protein sequence
MKQQTNRNRR WVLASRPHGA PQMDNFRLEE DDVATPGEGQ VLLRTVFLSL DPYMRGRMSD 
EPSYAPPVEP GCVMVGGTVS RVVASNHPDY RPDEWVLSYN GWQDYDISDG EGLVKLGDNP
QHPSWSLGIL GMPGFTAYMG LLDIGQPKEG ETLVVAAATG PVGATVGQIG KLKGCRVVGI
AGGAEKCRHA TDVLGFDLCL DHHADNFPQQ LAQACPQGID IYYENVGGKV FDAVLPLLNT
SARIPLCGLV SGYNATALPD GPDRLPLLMA TLLKKRIRLQ GFIINQDYGH RIHEFQQEMG
RWIKEGKIHY REQITDGLEN APEAFMGLLA GKNFGKVVIR LADDA