Gene SeD_A1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1750 
Symbol 
ID6871371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1689233 
End bp1689682 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content56% 
IMG OID642784887 
Productinner membrane protein YdcZ 
Protein accessionYP_002215555 
Protein GI198242653 
COG category[S] Function unknown 
COG ID[COG3238] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.466159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGT CTTTGACGCT TATCTTTTTG ATCGCCGCCG GCGTCGGGCT GGTGGTACAA 
AACAGTATTA TGGTGCGTAT TACGCAGGCA TCATCGACGA TTCTGATCGC TATGCTGTTG 
AACTCGCTGG TAGGGATCGT TTTATTTGTG ACGATATTGT GGTTTAAGCA AGGCGCTGCG 
GGTTTCGGCG AGCTGGTCGC CAGCGTTCGC TGGTGGACAT TGATCCCCGG TCTGCTGGGG 
TCATTTTTTG TATTTGCCAG CATTAGCGGG TATCAGAACG TTGGCGCCGC GACGACTATC 
GCGGTACTGG TCGCCAGCCA GTTAATCGGC GGACTGGCGC TGGATATCGC GCGTAGCCAC 
GGCGTCACGT TACGCGCAAT GGTCGGGCCG GCGTTTGGCG CGCTGTTGCT GGTCATTGGC 
GCATGGCTGA TTGCGAAGCG CCAGTTTTAA
 
Protein sequence
MNQSLTLIFL IAAGVGLVVQ NSIMVRITQA SSTILIAMLL NSLVGIVLFV TILWFKQGAA 
GFGELVASVR WWTLIPGLLG SFFVFASISG YQNVGAATTI AVLVASQLIG GLALDIARSH 
GVTLRAMVGP AFGALLLVIG AWLIAKRQF