Gene SeD_A1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1742 
Symbol 
ID6871653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1677809 
End bp1678579 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content47% 
IMG OID642784879 
Productperiplasmic dipeptidase 
Protein accessionYP_002215547 
Protein GI198242003 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.760741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAT GCGTATCTTC TTTCCTCCTG TTCAGCCTGT TGTCCGTTCA GGCAATGTCA 
GCTGAAAACC ATATTGATCT CCACCAGCCA AAAGACTTTG TCGATATTAC TACGGTCGCC 
CCCGACGTAC AGGTAGACAT GCGATACTTC AGTTCCCATA ACTTTATTGG TCGCCCCATT 
AAAGGCTATA ACGCGCCTGT TTGCCTGTTA ACACGACCAG CCGCGAACGC AGTGAAGCAG 
GTCGCCGATC GTTTACGCCC CTTCGGACTT ACCTTAAAAA TATATGATTG CTACCGTCCG 
CAAAGCGCAG TGAACGACTT TATCGCGTGG GCCAAAGATC CTTCTCAAAA CCAAATGAAA 
AACGAATTTT ATCCGCAGGT AGAGAAAAAT CGTCTGTTTG AGGAAGGTTA TGTTGCCGCC 
AGATCCGGCC ACAGTCGGGG AAGTACGCTT GATCTAACGA TTGTTCCACT TGACAGTAAA 
ATACCAATAT ACGATCCCGG ACGACCACTG GTGAATTGTA CTGCGTCCGC GGCGCAACGC 
TCGCCAGATA ATAGTCTGGA TTTTGGTACC GGCTTTGACT GTTTTAGTCC GTTATCCCAT 
CCCGATAATG TCATACTTAC CGCTCAGCAA CGCGCAAATA GGTTGTTATT ACAAACATTG 
ATGCGTGATG CGGGTTTTAC GCCACTGGAT ACTGAATGGT GGCACTTCTC TCTTACTCAT 
GAACCATACC CGAACACTTG GTTTGACTTT CCCGTTAAGC AGAGACCCTG A
 
Protein sequence
MVKCVSSFLL FSLLSVQAMS AENHIDLHQP KDFVDITTVA PDVQVDMRYF SSHNFIGRPI 
KGYNAPVCLL TRPAANAVKQ VADRLRPFGL TLKIYDCYRP QSAVNDFIAW AKDPSQNQMK 
NEFYPQVEKN RLFEEGYVAA RSGHSRGSTL DLTIVPLDSK IPIYDPGRPL VNCTASAAQR 
SPDNSLDFGT GFDCFSPLSH PDNVILTAQQ RANRLLLQTL MRDAGFTPLD TEWWHFSLTH 
EPYPNTWFDF PVKQRP