Gene SeD_A1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1740 
SymbolsifB 
ID6871466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1675410 
End bp1676360 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content39% 
IMG OID642784877 
Productsecreted effector protein 
Protein accessionYP_002215545 
Protein GI198242920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATTA CTATCGGGAG AGGGTTTCTA AAAAGTGAGA TGTTTTCCCA AAGTGCCATC 
TCTCAACGCT CCTTCTTTAC GTTACTATGG GAAAAGATTA AAGATTTTTT TTGTGACACG 
CAAAGATCCA CTGCCGATCA ATATATAAAG GAATTGTGTG ATGTTGCCTC TCCGCCTGAC 
GCGCAACGTT TATTTGATTT ATTTTGCGCG TTATATGAAT TATCATCACC ATCATGCAGA 
GGAAATTTCC ATTTTCAGCA CTATAAAGAT GCTGAGTGTC AGTATACAAA TCTCTGTATT 
AAAGATGGCG AAGATATTCC GTTATGCATT ATGATACGTC AGGATCACTA CTATTATGAG 
ATAATGAATA GAACAGTGCT CTGTGTTGAT ACTCAGTCTG CCCACCTGAA AAGATATTCT 
GATATTAATA TAAAAGCTAG CACTTATGTT TGTGAACCGC TATGTTGCTT GTTCCCTGAG 
CGGTTACAAC TCTCGCTATC CGGCGGTATA ACATTTTCCG TTGACCTAAA AAATATAGAA 
GAGACGCTTA TCGCCATGGC AGAAAAGGGG AATTTATGTG ACTGGAAGGA ACAGGAAAGA 
AAAGCCGCCA TCTCCTCCAG GATTAATCTG GGCATCGCCC AGGCAGGTGT AACAGCTATT 
GACGACGCTA TCAAAAACAA AATAGCCGCA AAGGTTATTG AGAATACTAA CTTAAAGAAT 
GCAGCGTTTG AACCAAATTA TGCACAAAGC TCAGTTACTC AAATTGTTTA TTCATGTTTG 
TTTAAGAATG AGATACTAAT GAATATGCTG GAAGAAAGTT CCTCTCATGG CCTGCTATGT 
TTAAACGAGC TTACTGAATA TGTAGCGCTA CAAGTTCATA ACAGCCTTTT TTCTGAAGAT 
TTATCTTCAC TCGTTGAAAC AACAAAAAAT GAGGCTCATC ACCAGAGTTG A
 
Protein sequence
MPITIGRGFL KSEMFSQSAI SQRSFFTLLW EKIKDFFCDT QRSTADQYIK ELCDVASPPD 
AQRLFDLFCA LYELSSPSCR GNFHFQHYKD AECQYTNLCI KDGEDIPLCI MIRQDHYYYE 
IMNRTVLCVD TQSAHLKRYS DINIKASTYV CEPLCCLFPE RLQLSLSGGI TFSVDLKNIE 
ETLIAMAEKG NLCDWKEQER KAAISSRINL GIAQAGVTAI DDAIKNKIAA KVIENTNLKN 
AAFEPNYAQS SVTQIVYSCL FKNEILMNML EESSSHGLLC LNELTEYVAL QVHNSLFSED 
LSSLVETTKN EAHHQS