Gene SeD_A1737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1737 
Symbol 
ID6874636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1672305 
End bp1672862 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content53% 
IMG OID642784874 
ProductXRE family transcriptional regulator 
Protein accessionYP_002215542 
Protein GI198244633 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTTAC AGGGGGGGAA AATGGATAAC CTGACACACT ATCTGGCGAC CACGTTAAGA 
ATGTTACGCC ATCAGCGAGG CTGGAGTTTA TCGCGTCTGG CGGAGATCTC CGGCGTCTCA 
AAAGCCATGT TGGGGCAGAT AGAGCGTAAT GAATCCAGCC CGACAGTCGC AACGCTGTGG 
AAAATTGCGA CGGGCCTGAA CGTTCCATTC TCAATGTTTA TTTCGCCGCC GCAGGCCGAA 
TTTCCGCCAA CCTTCGATCC CCAGCAGCAA GCGATGGTAA TCACACCGCT GTTTCCGTGG 
GACCCTGAAC TCTGTTTTGA CTATTTTTCT CTATTGCTGG CGCCTGGCAC GGTCAGCGAA 
TCAACGCCGC ATAAAGCCGG CGTTATCGAA CATGTGGTGG TGATTCAGGG TCGGCTGGAC 
ATGTGTACTG GTGGGGTATG GCAAACCATA GACGCCGGTA AAGGATTGCG TTTTGCCGGC 
GATACGGCGC ATACCTATCG CAACAGCAGT GACCAGACGG TTCATTTTCA CTCGCTGATC 
CATTACCCAC GTGATTAA
 
Protein sequence
MVLQGGKMDN LTHYLATTLR MLRHQRGWSL SRLAEISGVS KAMLGQIERN ESSPTVATLW 
KIATGLNVPF SMFISPPQAE FPPTFDPQQQ AMVITPLFPW DPELCFDYFS LLLAPGTVSE 
STPHKAGVIE HVVVIQGRLD MCTGGVWQTI DAGKGLRFAG DTAHTYRNSS DQTVHFHSLI 
HYPRD