Gene SeD_A1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1721 
Symbol 
ID6875733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1658984 
End bp1659550 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content42% 
IMG OID642784858 
ProductYceI family protein 
Protein accessionYP_002215526 
Protein GI198241860 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.292781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA ATTTTCTTGG TGCTGTCCTG TCTCTGGGTT TATTAAGTGC TGCTCATGCA 
GATGTATATA AATTTGATAA TACGCATACC AATGCGGTAT TTAATATCGA TCATTTCCAG 
ACCTCAACCA ATCATGGCGG GTTTTATGCT ATTAGCGGCG AACTGAAATA TCAGCCGGAA 
AAGCAAGATG CAGAGATGCG CGTGACGATT CCCGTAAGCG CCTTAAATAC CGGGGTGGAT 
ACGTTTGATA ACCATATCCG CAGTAGCGAT ATTCTGGATG CGGAAAAATA TCCAGAAATG 
GTATTTAAAT CAACAAAATG GCATTTTGAA GATAATAAAC CGGTTTCTAT TGACGGTTTG 
CTAACAATGA AGGGAGTAAC TAAGCCCGTT ACCTTAACCA CCACCAAGTT TGGCTGCTAT 
ATGAGCCCGA TATTCAAGGC GCAGGTTTGC GGTGGTGATT TTGTCACGCA AATAGATCGC 
ACCCAGTGGG GGGTAGATTA TCTGGTCGAT ATGGGGATGA CGAAAGTTGT CGATATAAAA 
ATCCAGGCAG AAGCGGTTAA GCAATAA
 
Protein sequence
MKKNFLGAVL SLGLLSAAHA DVYKFDNTHT NAVFNIDHFQ TSTNHGGFYA ISGELKYQPE 
KQDAEMRVTI PVSALNTGVD TFDNHIRSSD ILDAEKYPEM VFKSTKWHFE DNKPVSIDGL 
LTMKGVTKPV TLTTTKFGCY MSPIFKAQVC GGDFVTQIDR TQWGVDYLVD MGMTKVVDIK 
IQAEAVKQ