Gene SeD_A1718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1718 
Symbol 
ID6874698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1654004 
End bp1655347 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content54% 
IMG OID642784855 
Producthypothetical protein 
Protein accessionYP_002215523 
Protein GI198242447 
COG category[S] Function unknown 
COG ID[COG5383] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.058021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACA CCATCACGGC AGATGAGATT CGGGAACACT TTTCGCAGGC AATGTCGGCA 
ATGTACCAGC AGGAAGTTCC GCAGTACGGT ACGTTACTGG AACTTGTGGC TGACGTGAAT 
CTGGCGGTGC TGGAAAATAA TCCCAAACTG CATGAGCAGT TGGCTAATGC CGATGAACTG 
GCGCGATTGA ACGTGGAACG ACATGGCGCC ATTCGTGTTG GCACCGCAGA AGAACTTTCT 
ACCTTGCGTC GGATATTCGC CATCATGGGG ATGTACCCAG TAAGTTATTA CGATCTCTCT 
CAGGCGGGCG TGCCTGTGCA CTCCACGGCA TTTCGTCCCA TTGACGAGGC TTCGCTCTCG 
CGTAATCCCT TTCGCATGTT CACTTCGCTA TTACGCCTGG AGCTCATTGA AAACGCGGCA 
TTACGCCAGC GGGCGGCGGA AATCTTATCG CAGCGTGATA TTTTTACATC GCGCTGCCGA 
CAATTGCTGG ATGAGTACGA CGAGCAGGGC GGTTTTAGTG CTGCTCAGGC CGAAGAGTTC 
GTCCGTGAAA CGCTGGAGAC TTTTCGCTGG CATCGTCAGG CTACCGTTGA TGAAGAAACG 
TACCGCAGCC TGCATCGTGA GCATCGTTTA ATTGCCGACG TGGTCTGTTT TCCGGGATGC 
CACATTAACC ATCTGACGCC GCGTACTCTG GATATCGACC GGGTACAGGC CATGATGCCG 
GAGTGCGGCA TTACGCCTAA AATTCTTATC GAAGGTCCGC CTCGCCGCGA AGTGCCTATT 
CTGTTGCGGC AAACCAGTTT CAAAGCTCTG GAAGAGCAGG TGCTCTTCGT TGATGAAAAG 
CAGGGTACGC ACACGGCGCG CTTCGGCGAA ATTGAGCAAC GTGGCGTCGC GCTGACGCCA 
AAAGGTCGTC GATTATATGA CGAACTGTTG CACAAGGCGG GAACGGGTAA GGACAACTTC 
ACGCATCAAC TCCATTTGCG GGAGGTCTTT AACACCTTTC CGGATAGCGA ATTTCTGCTT 
CGCCAGCAGG GGCTTGCCTG GTTCCGTTAT CGCTTAACGC CTTCCGGCGA GGCGCATCGT 
CAGGCGATCC ATCCTGGCGA CGATCCGCAG CCGCTTATTG AGCGCGGTTG GGTGATCGCG 
CAGCCGATTA CCTATGAAGA TTTTCTTCCG GTCAGCGCAG CCGGCATTTT TCAGTCGAAT 
TTGGGAAATG AAACGCTGGC CAGAAGCCAC GGCAATGCCA GCCGCGACGC CTTTGAACAG 
GCGCTGGGAT GTGCTGTACG GGATGAATTT TCGTTATATC AGGAAGCGGA AGAACGCAGT 
AAACGCCGTT GCGGTCTGCT TTAA
 
Protein sequence
MANTITADEI REHFSQAMSA MYQQEVPQYG TLLELVADVN LAVLENNPKL HEQLANADEL 
ARLNVERHGA IRVGTAEELS TLRRIFAIMG MYPVSYYDLS QAGVPVHSTA FRPIDEASLS 
RNPFRMFTSL LRLELIENAA LRQRAAEILS QRDIFTSRCR QLLDEYDEQG GFSAAQAEEF 
VRETLETFRW HRQATVDEET YRSLHREHRL IADVVCFPGC HINHLTPRTL DIDRVQAMMP 
ECGITPKILI EGPPRREVPI LLRQTSFKAL EEQVLFVDEK QGTHTARFGE IEQRGVALTP 
KGRRLYDELL HKAGTGKDNF THQLHLREVF NTFPDSEFLL RQQGLAWFRY RLTPSGEAHR 
QAIHPGDDPQ PLIERGWVIA QPITYEDFLP VSAAGIFQSN LGNETLARSH GNASRDAFEQ 
ALGCAVRDEF SLYQEAEERS KRRCGLL