| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1710 |
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| Symbol | |
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| ID | 6875118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1646088 |
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| End bp | 1647314 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642784848 |
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| Product | secreted effector protein |
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| Protein accession | YP_002215516 |
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| Protein GI | 198246164 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.133007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.0148775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTGA GTGTTGGACA GGGTTATTTC ACATCATCTA TCAGTTCTGA AAAATTTAAT
GCGATAAAAG AAAGCGCACG CCTTCCGGAA TTAAGTTTAT GGGAGAAAAT CAAAGCATAT
TTCTTTACCA CCCACCATGC AGAGGCGCTC GAATGTATCT TTAATCTTTA CCACCATCAG
GAACTGAATC TAACACCGGT ACAGGTTCGC GGAGCCTACA TCAAACTTCG AGCCTTAGCG
TCTCAGGGAT GTAAAGAACA GTTTATTATA GAATCACAGG AACACGCCGA TAAGTTGATT
ATTAAAGATG ATAATGGTGA CAATATTTTA TCTATTGAGG TTGAATGTCA TCCGGAAGCT
TTTGGTCTTG CCAAAGAAAT CAATAAATCA CATCCCAAGC CCAAAAATAT TTCTTTGGGT
GATATTACCA GACTGGTATT TTTTGGCGAC AGCTTGTCTG ACTCCTTAGG GCGTATGTTT
GAAAAAACAC ATCATATCTT ACCCTCCTAT GGTCAATACT TTGGCGGAAG GTTTACTAAT
GGATTTACCT GGACTGAGTT TTTATCATCT CCACACTTCT TAGGTAAAGA GATGCTTAAT
TTTGCTGAAG GGGGAAGTAC ATCGGCAAGC TATTCCTGCT TTAATTGCAT CGGTGACTTT
GTATCAAATA CGGACAGACA AGTCGCATCT TACACCCCTT CTCACCAGGA CCTGGCGATA
TTTTTATTGG GGGCTAATGA CTATATGACA CTACACAAAG ATAATGTAAT AATGGTCGTT
GAGCAACAAA TTGATGATAT TGAAAAAATA ATTTCCGGTG GAGTTAATAA TGTTCTGGTC
ATGGGGATTC CCGATTTGTC TTTAACACCT TATGGCAAAC ATTCTGATGA AAAAAGAAAG
CTTAAGGATG AAAGCATCGC TCACAATGCC CTGTTAAAAA CTAATGTTGA AGAATTAAAA
GAAAAATACC CCCAGCATAA AATATGCTAT TACGAGACTG CCGATGCATT TAAGGTGATA
ATGGAGGCGG CCAGTAATAT TGGTTATGAT ACGGAAAACC CTTATACTCA CCACGGCTAT
GTACATGTTC CCGGGGCTAA AGACCCTCAG CTAGATATAT GTCCGCAATA CGTCTTCAAC
GACCTTGTCC ATCCAACCCA GGAAGTCCAT CATTGTTTTG CCATAATGTT AGAAAGTTTT
ATAGCTCATC ATTATTCCAC TGAATAA
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| Protein sequence | MPLSVGQGYF TSSISSEKFN AIKESARLPE LSLWEKIKAY FFTTHHAEAL ECIFNLYHHQ
ELNLTPVQVR GAYIKLRALA SQGCKEQFII ESQEHADKLI IKDDNGDNIL SIEVECHPEA
FGLAKEINKS HPKPKNISLG DITRLVFFGD SLSDSLGRMF EKTHHILPSY GQYFGGRFTN
GFTWTEFLSS PHFLGKEMLN FAEGGSTSAS YSCFNCIGDF VSNTDRQVAS YTPSHQDLAI
FLLGANDYMT LHKDNVIMVV EQQIDDIEKI ISGGVNNVLV MGIPDLSLTP YGKHSDEKRK
LKDESIAHNA LLKTNVEELK EKYPQHKICY YETADAFKVI MEAASNIGYD TENPYTHHGY
VHVPGAKDPQ LDICPQYVFN DLVHPTQEVH HCFAIMLESF IAHHYSTE
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