Gene SeD_A1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1709 
Symbol 
ID6875548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1645623 
End bp1645967 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content48% 
IMG OID642784847 
Productcyanate transport 
Protein accessionYP_002215515 
Protein GI198245654 
COG category[S] Function unknown 
COG ID[COG3326] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.382277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.0124774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTTA ACCGCTTTTG TTATTTACTC CTGATCTTCG CTGCGGTCGG AAGCATTTTT 
ACATCGCATC CCGTCGCGAT GTGGTTCCTG CTCGCCAATG TGCTAACGCT GGCGATCTAC 
GGTATAGACA AAACGGCGGC ACGTAAAACC TGGCGCAGAG TGCCGGAATC CACTTTGTTG 
GTGTTTGGGG TTGTCGGTGG GTGGCCTGGG GCGATTGTTG GTCAACAACT CTTCCGTCAT 
AAAACGCAAA AGCAGCCATT CAAAACATAC TTTATCGTCA GTGTGATAGT GAGTATTGTA 
GTTACGGTGG CGATTTATCG ACTCTATCCA TTTTTGTCTT ACTGA
 
Protein sequence
MYLNRFCYLL LIFAAVGSIF TSHPVAMWFL LANVLTLAIY GIDKTAARKT WRRVPESTLL 
VFGVVGGWPG AIVGQQLFRH KTQKQPFKTY FIVSVIVSIV VTVAIYRLYP FLSY