Gene SeD_A1699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1699 
Symbol 
ID6875248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1637337 
End bp1638137 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content55% 
IMG OID642784840 
Producthypothetical protein 
Protein accessionYP_002215508 
Protein GI198242299 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.216662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.00242518 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATACAA CGCCATTTCC GGCGCTCTCT GCGGAAACAT TGCTGGCGGT GAATACCGTC 
GGACAGTGGC TGGCGCAAAA TGATTTTTCC GGCGAACAAC CTTATTCGTC GGATTGCGTC 
GTCCTGGCGG GCAATGCGGT GATCCCCACT ATCGACGCGG CCTGTCGCAT CGCCAAAGCG 
CAAGGCGTTC CTTTACTGAT TAGCGGCGGT ATAGGTCATT CGACGCCGTT TTTGTACGCC 
GTGATTGCCC GGCATCCGCG CTACCACACT ATTCGCACAA CCGGACGCGC TGAAGCCGCG 
ATCCTCGCGG ATATCGCGAA CCAGTTCTGG CATATTCCGG CTGAGAAAAT TTGGCTGGAA 
GATCGGTCAA CTAATTGCGG CGAAAATGCC CGTTTCTCTT GCGCACTGAT CCGTCAGGCG 
AAAGAAAACA TTAACACGGC TATCGTTGTG CAAGACCCCA CCATGCAGCG GCGCACTATC 
GCGGCATTCC GGCGCGTGAC AAACGACGAC ACCGATGCGC CGCGCTGGCT GAGTTTTCCT 
GGTTTTGTTC CGGTACTGCG CCACCTTAAC GGCGGTACAC GTTTTGCCAA CGTTGAAGAG 
GGCATCTGGA CGGTGGAGCG TTATCTGTCT CTGATTGCCG GCGAGCTGCC ACGTTTGCGT 
GACGATGAAA CAGGGTATGG ACCGCGCGGT AAAGATTTTA TCATTCACGT TGATATCCCA 
CGCGATATTG AAAACGCATG GCAGGTATTG CAGGCAGATA CGACGCTGCG CAGTGCGTTA 
GAACAGAGAG CGTTACGCTA A
 
Protein sequence
MNTTPFPALS AETLLAVNTV GQWLAQNDFS GEQPYSSDCV VLAGNAVIPT IDAACRIAKA 
QGVPLLISGG IGHSTPFLYA VIARHPRYHT IRTTGRAEAA ILADIANQFW HIPAEKIWLE 
DRSTNCGENA RFSCALIRQA KENINTAIVV QDPTMQRRTI AAFRRVTNDD TDAPRWLSFP 
GFVPVLRHLN GGTRFANVEE GIWTVERYLS LIAGELPRLR DDETGYGPRG KDFIIHVDIP 
RDIENAWQVL QADTTLRSAL EQRALR