Gene SeD_A1693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1693 
Symbol 
ID6871497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1628818 
End bp1631454 
Gene Length2637 bp 
Protein Length878 aa 
Translation table11 
GC content55% 
IMG OID642784834 
Producthypothetical protein 
Protein accessionYP_002215502 
Protein GI198245893 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.00190171 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGGTA AATATAAAGC CGCCCTTGCG CTACTGTTAC TGCTGATTCT TATCCCTCTG 
ACGCTACTGA TGACCCTCGG GCTGTGGGTT CCCACTCTGG CGGGAATTTG GCTACCCGTC
GGTACCCGTA TCGCTCTGGA ACAAAGTCCA CGCCTGACAC GTCATGGGTT AGTGATTCCC
GATCTTCGCT ATCTGGTCAA TGATTGTTCG TTAGCGCATA TTACCCAGGC GGAACTGACG
CATCCCAGCC GTTGGTTGCT GAATATTAAA AGCCTTAAAC TGGATGCCGC ATGCCTGGCG
AAACTGCCCG CTACGGAAGC TTCTCCCGCC GCGCCGCGTA CGCTGGCGCA GTGGCAGTCA
ATGCTGCCCA ATACCTGGAT TAACATCGAT AATGTCATTC TCGCGCCCTG GCCGGAATGG
CAGGGCAAGC TGGCGATCTC CATGACGCCG GTCATTCAGC AGATACGTTA TCAGGGCGAA
AAAGTAAAAT TTCAAGGGCA GCTACGCGGT CAGGCATTGA CGGTGAGCCA ACTGGAGATC
GCCGCGCTGG CCAACCAGCC TCCCGTTAGC CTGGCGGGGG AATTTGTGTT GCCGCTGGTA
CCGGATGGCC TGCCGGTCAG CGGTCATGCG GCAGCGACCT TGCGTCTGCC GCAGGAACCG
TCGCTGGTGG ATGCGGAACT GGAGTGGCGT GATAACGCCG GACAGCTCAT CGTGATGGCG
CGAGGTAATC CTGACCCGAT TCTCGATCTC CCCTGGGCGG TAACGCGTCA GCGGCTTACC
ATCAGCGATG GCCGCTGGAA CTGGCCATAT CAGGGATTCC CCTTGAGCGG ACGTCTGGCT
TTTAATATCG ATAACTGGCA AGCCGGGCCG GATAATGCGC AAGTCAGCGG ACGCCTGAAT
ATTCTGACCC AGGGCGATGC CGGTAAAGCG AACGCTGTAC TGACTATCGG CCCGGGAAAA
CTCAGCATGG ATAGCAGTGA GATGCCTCTA CAGCTTACCG GCGAGGCTAA ACAGAAGGAT
TTAATCTTTT ATGCCGTATT GCCCGCTATG TTCCGCGGCA GTCTGGCCGA TCCGCAGCTC
ACCTTTGCAC CTGGCGCATT GCTACGCTCG CGCGGGCGGG TGATTGATGC GTTAGATATT
GATGAAATTC GTTGGCCGCT GGCGGGCGTT AAGGTGACGC CGCGCGGCGT TGATGGCCGA
TTACAGGCTA TTTTACGGGC GCACGAAAAT GAGATGGGCG ATTTCGTTCT TCATCTTGAT
GGCCTGGCCA ATGATTTTCT CCCTGATGCT GGTCGCTGGC GGTGGCGCTA TTGGGGGCAA
GGAAGCTTTA CGCCAATGCG CGCCCACTGG GATATTGCCG GACAGGGCGA ATGGCATGAT
AACACCATCA GGTTGACCAG TTTGTCCACC GGTTTTGATC AGTTGCACTA TGGCGCAATG
ACTGTCACAT CGCCAAGACT GGCGCTGAAT AAACCTATTG TCTGGGTTCG CGACGCCACA
ACGCCGTCGC TACAGGGCGC GCTGTCTCTG GTGGCGGGGA AAACCGTATT TACCAGTGGG
AGCGTGCTGC CGCCTTCTAC CCTTAATTTT AGCGTTGAAG GGCGAGAGCC AACCCTGTTC
CAGTTTAAAG GCGACCTTCG GGCGGGGGCG ATAGGGCCGG TACGGCTGAA TGGGCGCTGG
GATGGCGAAC GCCTTCGTGG ACAGGCCTGG TGGCCGAAGC AGTCGCTTAT CGTTTTCCAG
CCGTTGCTTC CACCGGACTG GAAAATGACG CTGCGCGAAG GCTCACTGTA TGCGCAGGTG
GCTTTTTCCG CCGCACAGGG GCAGGGGTTT GAAGCAGGTG GACACGGCGT GTTAAAAGGC
GGCAGCGCCT GGATGCCGGA TAACAAAATC AACGGCGTCG ATTTCATTCT GCCATTTCGC
TTCCACAACG GCGCGTGGCA ATTGGGGACG CGCGGGCCCA TCTCGCTGCG TATCGCCGGG
ATAGTTAACC AGGTCACGGC GAAAAATATC ACCGCTGATT TACAGGGCGG TTATCCCTGG
AGCGAGTCGA ATCCATTACT GCTAAGCGAT GTCAGCGTAG ACGTGCTGGG CGGTCAAATC
ATTATGAAAC AGTTGCGAAT GCCGCAGCAC GACCCGGCGC TTTTGCGGGT GCAAAATATT
TCATCCAGCG AATTGATTAG CGCCATAAAT CCAAAGCAAT TCGCCATGTC TGGTCCGGTC
AGCGGCGCGC TGCCGCTGTG GCTGAACAAT GAAAAATGGA TAATCAAAGA TGGCTGGCTT
ACGAATCCTG GGCCAATGAC GTTGCGTATC GATAAAGATA CTGCGGATGC GGTGGTGAAG
GATAATGTCA CGGCAGGCTC GGCGATCAAC TGGCTACGTT ATATGGAGAT TACGCATTCG
TGGACGAAAA TTAACGTTGA TAACCTGGGC GTACTAACGA TGCAGGCGGC TATTACCGGC
AAAAGCCGGG TAGATGGTAA AACCGCGATC GTTAACTTGA ACTATACCCA TGAAGAAAAT
GTGTTTACGC TGTGGCGCAG TTTGCGTTTT GGCGACAATT TACAGGCATG GCTTGAACAA
AATACAGCGT TGCCGCAACC TTCTTGCCGG AAAGACAAGG ACTGTGAGGA TAAATAA
 
Protein sequence
MKGKYKAALA LLLLLILIPL TLLMTLGLWV PTLAGIWLPV GTRIALEQSP RLTRHGLVIP 
DLRYLVNDCS LAHITQAELT HPSRWLLNIK SLKLDAACLA KLPATEASPA APRTLAQWQS
MLPNTWINID NVILAPWPEW QGKLAISMTP VIQQIRYQGE KVKFQGQLRG QALTVSQLEI
AALANQPPVS LAGEFVLPLV PDGLPVSGHA AATLRLPQEP SLVDAELEWR DNAGQLIVMA
RGNPDPILDL PWAVTRQRLT ISDGRWNWPY QGFPLSGRLA FNIDNWQAGP DNAQVSGRLN
ILTQGDAGKA NAVLTIGPGK LSMDSSEMPL QLTGEAKQKD LIFYAVLPAM FRGSLADPQL
TFAPGALLRS RGRVIDALDI DEIRWPLAGV KVTPRGVDGR LQAILRAHEN EMGDFVLHLD
GLANDFLPDA GRWRWRYWGQ GSFTPMRAHW DIAGQGEWHD NTIRLTSLST GFDQLHYGAM
TVTSPRLALN KPIVWVRDAT TPSLQGALSL VAGKTVFTSG SVLPPSTLNF SVEGREPTLF
QFKGDLRAGA IGPVRLNGRW DGERLRGQAW WPKQSLIVFQ PLLPPDWKMT LREGSLYAQV
AFSAAQGQGF EAGGHGVLKG GSAWMPDNKI NGVDFILPFR FHNGAWQLGT RGPISLRIAG
IVNQVTAKNI TADLQGGYPW SESNPLLLSD VSVDVLGGQI IMKQLRMPQH DPALLRVQNI
SSSELISAIN PKQFAMSGPV SGALPLWLNN EKWIIKDGWL TNPGPMTLRI DKDTADAVVK
DNVTAGSAIN WLRYMEITHS WTKINVDNLG VLTMQAAITG KSRVDGKTAI VNLNYTHEEN
VFTLWRSLRF GDNLQAWLEQ NTALPQPSCR KDKDCEDK