Gene SeD_A1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1685 
Symbol 
ID6871102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1622042 
End bp1622476 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content47% 
IMG OID642784828 
Productuniversal stress protein F 
Protein accessionYP_002215496 
Protein GI198245897 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.0435547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA CGATTCTTGT ACCCATCGAT ATTTCAGATT CAGAATTAAC TCAACGCGTA 
ATTTCGCATG TTGAAGCTGA AGCAAAGATT GACGACGCTA AAGTGCACTT TTTGACTGTA
ATCCCGTCTT TGCCCTATTA CGCTTCACTG GGACTGGCTT ATTCAGCAGA GCTTCCCGCA
ATGGACGATT TGAAAGCCGA AGCCAAATCT CAACTGGAAG CGATTATCAA GAAATTCAAC
CTTCCTGCGG ACCGCGTGCA GGCTCACGTT GCAGAAGGCT CTCCTAAAGA TAAGATTCTG
GAAATGGCAA AAAAATTACC GGCCGATATG GTGATTATCG CCTCGCATCG CCCGGATATT
ACTACCTATC TGTTGGGTTC CAACGCCGCA GCCGTTGTGC GTCATGCGGA ATGCTCCGTA
CTGGTGGTAC GCTAA
 
Protein sequence
MNRTILVPID ISDSELTQRV ISHVEAEAKI DDAKVHFLTV IPSLPYYASL GLAYSAELPA 
MDDLKAEAKS QLEAIIKKFN LPADRVQAHV AEGSPKDKIL EMAKKLPADM VIIASHRPDI
TTYLLGSNAA AVVRHAECSV LVVR