Gene SeD_A1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1682 
Symbol 
ID6872152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp1621350 
End bp1621490 
Gene Length141 bp 
Protein Length46 aa 
Translation table11 
GC content48% 
IMG OID642784825 
ProductRac prophage; integrase 
Protein accessionYP_002215493 
Protein GI198242226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.125194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.0274257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGGCAG GAGCGAACCC GGCATTTATC GCCAGCCAAA TGGGGCATGA AACTGCGCAG 
ATGGTGTATG AAATTTACGG TATGTGGATT GATGACATGA ACGACGAACA AGTAGCGATG 
TTGAATGCGC GGTTATCGTA A
 
Protein sequence
MTAGANPAFI ASQMGHETAQ MVYEIYGMWI DDMNDEQVAM LNARLS