| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1680 |
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| Symbol | |
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| ID | 6875799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1618946 |
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| End bp | 1620319 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642784823 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_002215491 |
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| Protein GI | 198243415 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.240536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.0183656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCTT TTTCAACCCT GAATGTTTTG CCCGCCGCCC AGCTCAATAA CCTTACTGAG
CTGGGCTATC TTGAGATGAC GCCTGTACAG GCCGCAGCAT TACCCGTCAT TCTGGCGGGA
AATGATGTGC GTGTGCAGGC CAGGACCGGT AGCGGCAAAA CGGCGGCGTT TGGTCTTGGG
CTCTTGCATC GAATTGACGT CAGTCTGTTC CAGACACAGG CGTTAGTGCT GTGCCCGACG
CGGGAGCTGG CGGATCAGGT TGCCGGAGAG TTACGTCGCC TGGCCCGTTT TCTGCCAAAT
ACCAAAATTC TGACCTTGTG TGGCGGGCAA CCCTTTGGCG CACAGCGCGA CTCGCTTCAG
CACGCTCCGC ATATCATTGT CGCGACGCCG GGGCGCCTGC TGGATCATTT ACAAAAAGAA
ACCGTATCGC TGGATGCGCT GCATATTCTG GTAATGGATG AAGCAGACCG AATGCTGGAC
ATGGGATTCA GTGACGCCAT TGATGAGGTG ATCCGCTTTG CGCCTGCGAC GCGCCAGACG
TTATTGTTTT CAGCAACCTG GCCTGAGGCC ATCGCGGCGA TTAGCGGTCG TGTACAGCAG
CAGCCAATAC GTATTGAAAT CGATACGGTA GATGCGCTAC CGGCTATCGA ACAACAGTTC
TTCGAAACGT CTGCGCATGA AAAAATTTCG CTGCTACAAA CGTTGCTTAG CCAGCATCAG
CCAGCGTCCT GCGTGGTATT TTGCAATACC AAAAAAGATT GTCAGGCCGT TTGTGATGCG
CTTAATGCGG TAGGACAAAG CGCGTTGGCG CTCCACGGCG ATCTGGAACA ACGCGACCGC
GACCAGACGT TGGTGCGTTT TGCAAACGGT AGCGCGCGCA TTCTGGTTGC CACCGACGTT
GCCGCGCGAG GATTAGACAT TAAATCGCTC GAACTGGTGG TTAACTATGA ACTGGCCTGG
GACCCGGAGG TGCATGTCCA TCGTATTGGC CGTACGGCGC GCGCGGGAAG CAGCGGCCTG
GCGATCAGTT TCTGCGCGCC GGAAGAGGCG CAGCGGGCGA ATATTCTTTC AGAAATGCTG
CAACTCAAGC TGAACTGGCT GAATGCGCCC GCCCGGCAGC CGTCACTCCC TCTGGCCGCA
GAGATGGCTA CCCTATGCAT TGACGGCGGC AAAAAAGCGA AAATGCGTCC GGGAGATATT
TTGGGCGCGC TGACCGGCGA TATTGGATTA GACGGGGCGG ATATTGGCAA AATTAACGTG
CATCCAATGC ACGTTTACGT CGCCGTACGT CAAGCAGTAG CGCAAAAAGC CTGGAAGCAG
TTGCAAAACG GGAAGATCAA AGGCAAGTCA TGCCGGGTAC GGCTATTAAA ATGA
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| Protein sequence | MTAFSTLNVL PAAQLNNLTE LGYLEMTPVQ AAALPVILAG NDVRVQARTG SGKTAAFGLG
LLHRIDVSLF QTQALVLCPT RELADQVAGE LRRLARFLPN TKILTLCGGQ PFGAQRDSLQ
HAPHIIVATP GRLLDHLQKE TVSLDALHIL VMDEADRMLD MGFSDAIDEV IRFAPATRQT
LLFSATWPEA IAAISGRVQQ QPIRIEIDTV DALPAIEQQF FETSAHEKIS LLQTLLSQHQ
PASCVVFCNT KKDCQAVCDA LNAVGQSALA LHGDLEQRDR DQTLVRFANG SARILVATDV
AARGLDIKSL ELVVNYELAW DPEVHVHRIG RTARAGSSGL AISFCAPEEA QRANILSEML
QLKLNWLNAP ARQPSLPLAA EMATLCIDGG KKAKMRPGDI LGALTGDIGL DGADIGKINV
HPMHVYVAVR QAVAQKAWKQ LQNGKIKGKS CRVRLLK
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