Gene SeD_A1675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1675 
Symbol 
ID6871538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1615204 
End bp1615767 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content52% 
IMG OID642784819 
ProductSmr protein/MutS2 
Protein accessionYP_002215487 
Protein GI198245412 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.377417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.101642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTTG ACGATAAAGC GCTGTTTCTT GACGCCATGG AGGATGTCCA GCCGCTGAAA 
CGCCATACTG ATGTACACTG GCAGCCAACG CGTAATCTTA AAACGCCCCA GCGTATCGAC 
ACGCTTCAGC TTGATAATTT CCTGACGACG GGCTTTCTGG ATATTCTGCC GCTGAATGAA 
CCGCTGGAAT TTCGTCGGGA AGGATTGCAG CAGGGTGTCA TCGACAAGTT ACGCAGTGGG 
AAATACCCTC AGCAGGCCAG CCTCAATTTG TTACGCCAGC CGGTCGAAAC GTGCCGAAAA 
ATGCTGTTTC GTTTTATCCT GGAGGCGCAG AAAGAGGGGT TGCGTAATGT CCTGATCATT 
CATGGTAAAG GGCGAGAGGC GAAGTCGCAT GCCAATATCG TCCGAAGCTA TGTGGCCCGT 
TGGTTGACAG AGTTTGAAGA TGTACAGGCT TATTGTTCGG CGCTGCCGCA CCATGGCGGC 
GGCGGGGCAT GTTATGTCGC GTTACGTAAA ACAGTGCAGG CTAAACAGGA TAACTGGGAG 
CGCCATGCGA AGCGTAGTCG GTAA
 
Protein sequence
MNLDDKALFL DAMEDVQPLK RHTDVHWQPT RNLKTPQRID TLQLDNFLTT GFLDILPLNE 
PLEFRREGLQ QGVIDKLRSG KYPQQASLNL LRQPVETCRK MLFRFILEAQ KEGLRNVLII 
HGKGREAKSH ANIVRSYVAR WLTEFEDVQA YCSALPHHGG GGACYVALRK TVQAKQDNWE 
RHAKRSR