Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A1670 |
Symbol | |
ID | 6875102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 1610806 |
End bp | 1611837 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642784814 |
Product | MscS family inner membrane protein YnaI |
Protein accession | YP_002215482 |
Protein GI | 198246129 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.107683 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACTG AATTTTTTCT CAAAAACGCA TTTAATCTGG CGATACTTTT CAGTTGCGGC ATGGCGTTGC TGGTCGTGAG ATTTTGGCTC AGCCGTAACG TACAGTGGAA GAAAGGATTC ACGTTCCATG CGGCACAGTT TTTTATTTAC GCGATTATTA TTGGGACCAT CGGGAGCATC CTGAATAATG CTATTGAAGA TTATAATTTG CGTTTTATCT CTTCCGGGGT CATTGATTTT ATCTGCACCT CGCTCATTGC GCTTATTCTG ACGATAAAAC TTTTCCTGAT TATTAACCAA TTTGAAAAAG CACAGGTCAA TAAAGGTAGA GATGTCACCA GTACCCGTAT TCTGGCACGG GTCATAAAAA TAACCATTAT TGTCGCGATT GTCTTATTGT ATGGCGAACA TTTTGGCATG AGTCTGTCCG GTCTGCTGAC CTTTGGCGGT ATCGGCGGTA TCGCTGTTGG TATGGCGGGC AAAGATGTCC TGAGCAATTT TTTCTCCGGT ATTATGCTCT ATTTCGATCG CCCCTTCAGT ATCGGAGACT GGATTCGTTC TCCTGACAGA AATATCGAAG GTACGGTCGC CGAAATCGGC TGGCGAATTA CGCGAATTAA CACATTCGAC CACCGCCCGT TGTACGTGCC TAATTCCGTC TTTTCATCCA TTAGCGTTGA GAATCCGGGA CGGATGACCA ACCGTCGAAT AAAAACGGTT ATTGGATTAC GTTACGAAGA TGCCGACAAA ATTGGCCTCA TTGTTGACGC TATCAGAAAC ATGTTGCAGG CGCACAGAGA TATCGATCAG AAACAGACGC TGTTGGTCTA TTTTAATGAA TTCGCCGACT CTTCGCTGAA TATTATGGTG TATTGCTTTA CCAAAACAAC AGTATGGCAG GAATGGCTTG CCGTACAGCA GGATGTTTAC CTGAAAATTA TTGCGATTGT CCAGGAAAAC GGCGCTGACT TCGCCTTCCC AAGCCAGACG CTCTATATCG ATGACCCGGA GACCGCGCCT GCGACAAAAT AA
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Protein sequence | MFTEFFLKNA FNLAILFSCG MALLVVRFWL SRNVQWKKGF TFHAAQFFIY AIIIGTIGSI LNNAIEDYNL RFISSGVIDF ICTSLIALIL TIKLFLIINQ FEKAQVNKGR DVTSTRILAR VIKITIIVAI VLLYGEHFGM SLSGLLTFGG IGGIAVGMAG KDVLSNFFSG IMLYFDRPFS IGDWIRSPDR NIEGTVAEIG WRITRINTFD HRPLYVPNSV FSSISVENPG RMTNRRIKTV IGLRYEDADK IGLIVDAIRN MLQAHRDIDQ KQTLLVYFNE FADSSLNIMV YCFTKTTVWQ EWLAVQQDVY LKIIAIVQEN GADFAFPSQT LYIDDPETAP ATK
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