Gene SeD_A1663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1663 
Symbol 
ID6873489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp1605426 
End bp1607408 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content51% 
IMG OID642784807 
Producthypothetical protein 
Protein accessionYP_002215475 
Protein GI198245457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.0949779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTTTT CTAAAAAACC CATTACTAAA TATATAACCT GGGCCATTGT TACCAGTCAG 
ATTCCACTGC CGGTCATTGC TGATAGCGAT AATGAAATTC AGTCGTGGAT TGCGGGGACG
GCATCGTCTA TTTCTCCGCA TCTGCAGGAG GGGACGCTGG AGGATTATGC CAAAGGAAAA
ATAAAGGCGT TACCAGGGCA GGCCGCTAAT CATCTGGTGA ACGAGGGGAT AAAGAGCGCT
TTTCCGGAGA TTATTTTCCG TGGTGGCGTC AATCTTGAAG ATGGCGCGAA ATATCGCTCA
TCAGAGTTCG ATATGTTTAT TCCCGTCCAG GAAACAACAT CGTCTTTACT CTTTGGTCAG
CTTGGCTTTC GCGACCACGA CAACAGCAGT TTCGATGGCC GCACCTATGT TAACGTTGGT
ATGGGTTACC GCCAGGAGGT CAATGGATGG CTGCTCGGCG TCAATACGTT TCTGGATGCC
GACATCCGTT ATTCCCACTT ACGTGGCGGC ATTGGCGGGG AAGTTTATAA AGACAGTCTG
GCCTTTTCCG GCAACTATTA TTTCCCTCTC ACCGGCTGGA AAACGTCAGC AGCGCATGAA
TTACATGATG AGCGTCCGGC ATATGGCTTT GATCTGCGAA CAAAAGGCAC GCTTCCCGAT
TTTCCCTGGT TCAGTGGCGA GCTCACATAT GAACAGTATT ACGGGGATAA AGTTGATCTA
TTGGGTAACG GTACATTAAG CCGGAATCCC CGCGCCGCAG GTGCGGATCT GGTCTGGAAT
CCTGTCCCCT TGCTTGAGGT CAGAGCAGGA TATCGGGACG CCGGTAACGG CGGCTCGCAG
GCAGAGGGCG GTCTGAGAGT CAACTATTCC TTCGGTACGC CGTTACATGA ACAGCTTGAT
TACCGCAACG TTGGTGCGCC GTCAAATACG ACTAATCGGC GTGCCTTTGT CGATCGTAAT
TACGATATCG TCATGGCGTA TCGGGAGCAG GCCAGTAAAA TCCGCATTAC GGCAATGCCG
GTTTCAGGCC TGTCCGGGAC GCTGGTGACA TTAATGGCGA CGGTAGATAG CCGTTACCCG
ATTGAGAAGG TTGAGTGGTC GGGTGATGCG GAACTTCTCG CCGGACTCCA GCTTCAGGGG
AGTTTGGGCA GCGGCCTTAT CCTTCCACAA CTTCCGCTGA CGGTGACCGA CGGTCAGGAG
TATAGCCTTT ATTTAACGGT GACTGACAGC CGGGGTACTC GCGTGACCTC CGAGCGTATC
CCGGTAAGGG TGACACAGGA TGAGACCAGT TTCCGTTCAT GGATAAATGT TATCAATGAC
GATGTTCAGG TTGAGGACGG CAACTTTGTT ATCAGTACGC CGCTTCCTGC CGGCGAAGAG
GGGAAGGTTA TTGAGTGGCA CTACGTGCGC GAGCGCTCTG AAGAGGAGTG GGCGTCGCTC
AAACCACGTC ATATTAAGTA TCAATCAGAT ATGCCGGGTC TGGCATTTAA AGCGCTCGGT
GGCACAGAGC GTGACGGCCA TTGGGTTGAA CGGGTTCTGG TGACCCATAT CGGCGATGAT
ACCCGCTCGC TCAAATTACA TATTGAAGCA AGCGGACCAG ACGATAAACA TCCGGTGAAG
GGGACCGTAC TGCTGCAAGC GCAGCCAGAC AGCATTGCGC AGAAGGTCAC TTCTGTGGAG
GTGCTTTTTA CGCCGGGTAC TGAAGAAGCC AACGGAAGCG TTACTGCGCC AGTCGTCGGA
ACAGAAATGC GAGCCAGAAC GATTTGTGTA AATAACACGG ACTGTACTGA TGCGTTTAAT
TATCAGTGGG AAATCTCGGA TGAAATGAAA TCCTGGCAAT CCGTACCGGG GGCGACAAAG
GCCACCTGGC TTATCCCTTA TAGCCTTAAT GGGGAATCGC TACAGAATAA ATATATCCGC
GTCAGAATTA TTTCTGATAA AGAAAATGCC AAGAGTTCTA CCGCAGCATC TGATGCGAAT
TAA
 
Protein sequence
MVFSKKPITK YITWAIVTSQ IPLPVIADSD NEIQSWIAGT ASSISPHLQE GTLEDYAKGK 
IKALPGQAAN HLVNEGIKSA FPEIIFRGGV NLEDGAKYRS SEFDMFIPVQ ETTSSLLFGQ
LGFRDHDNSS FDGRTYVNVG MGYRQEVNGW LLGVNTFLDA DIRYSHLRGG IGGEVYKDSL
AFSGNYYFPL TGWKTSAAHE LHDERPAYGF DLRTKGTLPD FPWFSGELTY EQYYGDKVDL
LGNGTLSRNP RAAGADLVWN PVPLLEVRAG YRDAGNGGSQ AEGGLRVNYS FGTPLHEQLD
YRNVGAPSNT TNRRAFVDRN YDIVMAYREQ ASKIRITAMP VSGLSGTLVT LMATVDSRYP
IEKVEWSGDA ELLAGLQLQG SLGSGLILPQ LPLTVTDGQE YSLYLTVTDS RGTRVTSERI
PVRVTQDETS FRSWINVIND DVQVEDGNFV ISTPLPAGEE GKVIEWHYVR ERSEEEWASL
KPRHIKYQSD MPGLAFKALG GTERDGHWVE RVLVTHIGDD TRSLKLHIEA SGPDDKHPVK
GTVLLQAQPD SIAQKVTSVE VLFTPGTEEA NGSVTAPVVG TEMRARTICV NNTDCTDAFN
YQWEISDEMK SWQSVPGATK ATWLIPYSLN GESLQNKYIR VRIISDKENA KSSTAASDAN