Gene SeD_A1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1658 
Symbol 
ID6871426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1600685 
End bp1601275 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content57% 
IMG OID642784802 
ProductTetR family transcriptional regulator 
Protein accessionYP_002215470 
Protein GI198242734 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.166061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACAA AACATAGCCG AACGCCGGGT CGCCCTCGCC AGTTCGATCC GGAGCAAGCC 
ATTGAAACCG CTCAACACTT ATTTCATTCG CGCGGATACG ACGCGGTGAG CGTAGCGGAT 
CTGACAAAAG CGTTCGGGAT CAATCCTCCC AGTTTCTATG CGGCGTTTGG CAGCAAGCTG 
GGGCTGTATA CTCGCGTATT AAAGCGTTAC AGGATGACCG ACGCGATTCC GCTCGGGGCG 
CTTCTGCGTC ACGATCGCCC GACCGCGAAG TGCCTTATCG ATGTGCTGAT GGAAGCGGCA 
AGACGTTACG CTGCCGATCC TGATGCCACT GGATGTCTGG TTCTGGAGGG CGCTCATTGT 
AACGATAAAC CGGCACGAGA GGCCGCCTGC GAGTTTTACA TCGCTGCTGA AAACCTGATT 
CGCACTTATG TCGCCATGCG GTATCCGCAA GAGGCTGACC GGACGACGGA CTTTATGGGG 
ACGCTAATGG CGGGGCTTTC CGCCAAGGCG CGAGCGGGGT ATAGCCTGGA GCGTCTTCAG 
GAGAGCGTGC TTCTGGCTGG GGATGTGCTG GAGCGATTAC TGCCGGATTA A
 
Protein sequence
MTTKHSRTPG RPRQFDPEQA IETAQHLFHS RGYDAVSVAD LTKAFGINPP SFYAAFGSKL 
GLYTRVLKRY RMTDAIPLGA LLRHDRPTAK CLIDVLMEAA RRYAADPDAT GCLVLEGAHC 
NDKPAREAAC EFYIAAENLI RTYVAMRYPQ EADRTTDFMG TLMAGLSAKA RAGYSLERLQ 
ESVLLAGDVL ERLLPD