Gene SeD_A1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1655 
Symbol 
ID6872627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1597753 
End bp1598658 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content55% 
IMG OID642784799 
Productregulatory protein LysR:LysR, substrate-binding 
Protein accessionYP_002215467 
Protein GI198243188 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.066773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGC TGGAAGCGAT GCAGGTCTAT GTTTGCGTAG TGGATACCCA TAGTTTTATC 
AGAGCCGCCG AAGTGCTTGG CGTGCCGCGC TCAACGGTAT CGCGAGTGGT TAAAGAACTG 
GAATCCTGGC TTAAGATTCA ACTTTTGCAA CGTACAACCC GCAAACTTAG CGTGACCGCA 
GAGGGGCGGC GTTACTACGA AGAGTGCAAA AGAGTGCTGG CAGATATCGC GGCCATGGAG 
TCGTCATTTC CCGGCCGGGC GGCACAACCC AAAGGGCGTT TTAAAGTGGG GATGCCGCAA 
TCTCTCGCCC GGCATTGCAT TATTCCTACG CTCCCGGCCT TTTTGTGCCA GTATCCGGAG 
CTGGAGCTGA TACTTTGTTC CAGCGATAGC GTGGAGGATA TTATCCTTCA AGGGTATGAC 
TGCGTGATTC GGGCCGGCAG AATCGATGAT TCCACCACGC TGGTTGCCCG TCCACTTGCC 
AGCTTTAACT GGGTGATAGC AGCATCGCCC ACTTACATTG AGCGTTACGG TAGCCCTGAA 
AATTTAGATG ATCTGCAAAA ACACCATGCG GTCGGCTACC TGAACCACCG CACCGGGCGT 
ACCACCGACT GGTTTTTTAC GCGTGAGGGG GAGGATTACG CGATGCGGGT GCAGGAGACG 
CTGGTTGTCG ATGATACGGA CGCTTATATT CAGGCCGGAA TACAGGGGCT GGGGTTAATT 
CGCGTCGCCA GCTATCTGGT TGCGCCGTAT CTGCACAGCG GGGCGCTGGT GACCTGCATG 
GACAACCATT TTTATGATTT GCCGCTTGCG CTGGTCTATC CGCAAAACAG GTTTCTGCCG 
CCTGCGGTAC GCGCTTTTTA TGACTGGTGC AAAACGGCGC TGAGCCAGCC GGAGCCTCTT 
CGCTAA
 
Protein sequence
MDKLEAMQVY VCVVDTHSFI RAAEVLGVPR STVSRVVKEL ESWLKIQLLQ RTTRKLSVTA 
EGRRYYEECK RVLADIAAME SSFPGRAAQP KGRFKVGMPQ SLARHCIIPT LPAFLCQYPE 
LELILCSSDS VEDIILQGYD CVIRAGRIDD STTLVARPLA SFNWVIAASP TYIERYGSPE 
NLDDLQKHHA VGYLNHRTGR TTDWFFTREG EDYAMRVQET LVVDDTDAYI QAGIQGLGLI 
RVASYLVAPY LHSGALVTCM DNHFYDLPLA LVYPQNRFLP PAVRAFYDWC KTALSQPEPL 
R