Gene SeD_A1647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1647 
Symbol 
ID6872353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1588281 
End bp1589678 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content54% 
IMG OID642784791 
Producthypothetical protein 
Protein accessionYP_002215459 
Protein GI198242792 
COG category[R] General function prediction only 
COG ID[COG3106] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.000246236 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCGAC TTAAAACTGA ACTCAACGCG CTGGTCAATC GTGGGGTAGA CAGGCATTTG 
CGTCTTGCCG TAACCGGGTT GAGCCGCAGC GGTAAAACAG CGTTTATCAC GGCGATGGTT 
AACCAGTTGC TTAATGTCCA CGCGGGCGCG CGCTTACCGT TGCTCAGCGC GGTACGCGAA 
GAACGCCTGC TTGGCGTAAA GCGCGTGCCT CAACGTGATT TTGGTATTCC CCGTTTTACC 
TACGATGAGG GGATACTTCA GCTTTATGGC AATCCTCCCG CATGGCCCAC ACCGACGCGC 
GGCGTCAGTG AGATTCGGCT GGCGTTGCGC TATCGCTCCA ACGACTCGCT GCTGCGCCAT 
TTTAAAGATA CCTCGACATT GTATCTGGAG ATTGTGGACT ATCCAGGGGA ATGGTTACTC 
GATCTGCCCA TGCTGGCTCA GGATTATTTA AGCTGGTCCC GTCAGATGAA CGGCTTGTTA 
CAAGGACAAC GCGCTGAGTG GGCCGCAAAA TGGCGGCAAC TTTGCGACGG GCTCGATCCG 
CTGGCACCCG CCGATGAAAA CCGGCTGGCG GAGATTGCCG CCGCCTGGAC GGATTATTTG 
CATCAGTGTA AATCGCAGGG ATTGCATTTT ATTCAACCTG GACGGTTTGT TTTGCCGGGC 
GATATGGCGG GTGCGCCAGC GTTGCAGTTT TTCCCGTGGC CGGATGTGGA CGCCTTCGGC 
GAGTCAAAAC TGGCGCAGGC GGATAAACAG ACCAACGCTG GAATGCTGCG CGAACGCTTT 
AACTACTATT GCGAAAAAGT GGTCAAAGGG TTCTATAAAA ATCATTTTCT ACGCTTTGAT 
CGCCAGATTG TACTGGTCGA CTGTCTGCAA CCGCTTAATA GCGGGCCGCA GGCGTTTAAT 
GATATGCGTC TCGCCTTAAC GCAGTTGATG CAAAGTTTTC ACTATGGCCA GCGGACTCTG 
TTTCGCCGCT TGTTTTCGCC GGTGATTGAT AAATTGCTGT TCGCCGCGAC GAAAGCCGAC 
CATGTCACCC TCGACCAACA TGCCAATATG GTGGCCTTGC TCCAGCAGCT TATTCAGGAT 
GCCTGGCAAA ATGCCGCGTT TGAAGGCATT AGTATGGATT GCCTGGGGCT GGCGTCGGTA 
CAGGCGACCA CCAGCGGCGT GATTGAGGTC AACGGTGAAA AAATCCCGGC TTTACGTGGA 
AACCGTTTGA GTGACGGCGC GCCGTTAACC GTGTACCCCG GCGAAGTGCC TTCGCGTTTG 
CCGGGACAAG CGTTTTGGGA TAGTCAGGGT TTTCAGTTCG AAGCCTTTCG TCCGCAGGTG 
ATGGATGTTG ATAAACCGTT ACCACATATT CGTCTGGACG CTGCGCTGGA GTTTTTAATA 
GGAGATAAGC TGCGATGA
 
Protein sequence
MKRLKTELNA LVNRGVDRHL RLAVTGLSRS GKTAFITAMV NQLLNVHAGA RLPLLSAVRE 
ERLLGVKRVP QRDFGIPRFT YDEGILQLYG NPPAWPTPTR GVSEIRLALR YRSNDSLLRH 
FKDTSTLYLE IVDYPGEWLL DLPMLAQDYL SWSRQMNGLL QGQRAEWAAK WRQLCDGLDP 
LAPADENRLA EIAAAWTDYL HQCKSQGLHF IQPGRFVLPG DMAGAPALQF FPWPDVDAFG 
ESKLAQADKQ TNAGMLRERF NYYCEKVVKG FYKNHFLRFD RQIVLVDCLQ PLNSGPQAFN 
DMRLALTQLM QSFHYGQRTL FRRLFSPVID KLLFAATKAD HVTLDQHANM VALLQQLIQD 
AWQNAAFEGI SMDCLGLASV QATTSGVIEV NGEKIPALRG NRLSDGAPLT VYPGEVPSRL 
PGQAFWDSQG FQFEAFRPQV MDVDKPLPHI RLDAALEFLI GDKLR