| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1642 |
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| Symbol | pspA |
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| ID | 6871862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1586190 |
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| End bp | 1586858 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642784786 |
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| Product | phage shock protein PspA |
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| Protein accession | YP_002215454 |
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| Protein GI | 198242518 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.000040084 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGTATTT TTTCTCGTTT TGCCGACATC GTGAACGCCA ATATCAATGC GTTGTTGGAA
AAAGCGGAAG ATCCGCAGAA GCTGGTGCGC CTGATGATTC AGGAGATGGA AGATACGCTG
GTGGAGGTTC GCTCGAACTC CGCGCGTGCT TTAGCGGAAA AGAAACAGTT ATCCCGTCGC
ATTGAACAGG CTACGGTTCA GCAGACCGAG TGGCAGGAAA AAGCGGAACT GGCTCTGCGC
AAAGATAAAG ACGATCTGGC GCGCGCCGCA TTGATTGAAA AACAAAAGCT GACCGATTTA
ATTGCTACGC TTGAACAGGA AGTCACGCTG GTGGATGACA CGCTGGCGCG CATGAAGAAA
GAGATTGGCG AGCTGGAAAA CAAACTCAGC GAAACACGCG CTCGCCAGCA GGCGCTGATG
CTGCGTCATC AGGCGGCGAG TTCTTCCCGC GATGTCCGTC GTCAGCTTGA CAGCGGCAAA
CTGGATGAAG CCATGGCGCG GTTTGAATCC TTTGAACGTC GTATCGATCA AATGGAAGCG
GAAGCGGAAA GCCATCGTTT TGGTAAGCAG CAATCGCTGG ACCAACAGTT TGCCAACCTG
AAAGCCGATG ATGAAATCAG CGAGCAGCTG GCGCAGTTGA AAGCCAAAAT GAAGCAAGAT
AATCAATAA
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| Protein sequence | MGIFSRFADI VNANINALLE KAEDPQKLVR LMIQEMEDTL VEVRSNSARA LAEKKQLSRR
IEQATVQQTE WQEKAELALR KDKDDLARAA LIEKQKLTDL IATLEQEVTL VDDTLARMKK
EIGELENKLS ETRARQQALM LRHQAASSSR DVRRQLDSGK LDEAMARFES FERRIDQMEA
EAESHRFGKQ QSLDQQFANL KADDEISEQL AQLKAKMKQD NQ
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