Gene SeD_A1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1634 
Symbol 
ID6871714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1577472 
End bp1578449 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content42% 
IMG OID642784778 
Productputative inner membrane protein 
Protein accessionYP_002215446 
Protein GI198241984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.137142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00000000000580206 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCGAGA CGGAGTGTGC TGAACGTTGC GTCGATTTTT TAAAAGAAAC GATGTTTAAT 
TATAATAACG GGGAAATTAC GCTTGCCGCT TTGGGTAATG ATAATCTACC GCCGAGCGAG 
GCAGGTAGTA ATGGAATCTA TGAGGCTTTT GAGCAACGTT TGATAGACTT CCTGACCACG 
CCCGCCACGG CGTCTGGTGA TGAGAGCGGC GCTATTGATC AGACGGATGC ATCACAACCA 
GCGGCAATAG AGGCGTTTAT TAACTCGCCG GAGTTTCAGA AAAATATTCG CATGCGTGAT 
ATTGAAAAAA ATAAAATAGG TAGCGGAAGT TATGGGACAG TCTATCGGTT ACATGATGAC 
TTTGTTGTTA AGATTCCAAT TAATGAGCGG GGAATAAAAG TGGATGTTAA CTCTCAGGAA 
CATCGTAATT GTCATCCTGA GCGTGTCAGT AAGTATTTGA ATATGGCCAA TGGCGACAAG 
AATTTTTCTC GTTCGGCCAT CATGAATATT AATGGTAAAG ACGTTACGGT TTTAGTTTCA 
AAATATATTC AAGGTCAGGA GTTCGATGTT GAAGATGAAG ATAACTATCG AATGGCGGAG 
GCGCTTCTTA AATCCCGGGG GGTTTATATG CATGATATAA ATATCTTAGG TAATATTCTG 
GTTAAAGAGG GGGTTCTTTT CTTTGTGGAT GGCGATCAAA TCGTGTTATC ACAAGAATCA 
CGGCAACAGC GAAGCGTTTC TCTTGCAACA AGGCAACTGG AAGAGCAAAT TAAGGCCCAT 
CACATGATAA AATTAAAGCG GGCCGAGACC GAAGGAAATA CTGAAGATGT TGAATATTAT 
AAGTCACTTA TTACGGATCT TGATGCGTTA ATCGGAGAGG AAGAACAGAC ACCTGCGCCA 
GGAAGACGTT TTAAACTAGC CGCGCCGGAG GAAGGGACTC TTGTGGCTAA GGTATTAAAG 
GATGAATTAA AAAAATAG
 
Protein sequence
MTETECAERC VDFLKETMFN YNNGEITLAA LGNDNLPPSE AGSNGIYEAF EQRLIDFLTT 
PATASGDESG AIDQTDASQP AAIEAFINSP EFQKNIRMRD IEKNKIGSGS YGTVYRLHDD 
FVVKIPINER GIKVDVNSQE HRNCHPERVS KYLNMANGDK NFSRSAIMNI NGKDVTVLVS 
KYIQGQEFDV EDEDNYRMAE ALLKSRGVYM HDINILGNIL VKEGVLFFVD GDQIVLSQES 
RQQRSVSLAT RQLEEQIKAH HMIKLKRAET EGNTEDVEYY KSLITDLDAL IGEEEQTPAP 
GRRFKLAAPE EGTLVAKVLK DELKK