| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1627 |
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| Symbol | |
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| ID | 6875427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1568943 |
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| End bp | 1569695 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642784772 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_002215440 |
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| Protein GI | 198245337 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0547167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 3.75705e-17 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACTCCC GACAACAATC AATTTTGCAA ATGGTGGTTG ATAAAGGCCA GATGAGCGTT
GCTGAACTGG CGAAAATTAC CGGCGTATCT GAAGTCACGA TTCGTCAGGA TCTGAATACC
CTGGAAAAGC AGAGCTATTT ACGCCGTGCG CACGGTTTCG CCGTTTCGCT TGAGAGCGAT
GACGTAGAGA CTCGCATGAT GACGAACTAC ACGCTAAAAC GCCGACTGGC GGAGTTCGCC
GCCTCGCTGG TCAGTCCAGG GGAATCCGTT TTTATTGAAA ATGGCAGCAG CAATGCGCTA
TTGGCCCGGA CGCTGGCGGA ACAAAAAGAT GTCACGATCA TCACCGTGAG CAGTTATATC
GCGCACCTGC TCAAAGAGAC CCCTTGCGAA GTCATTCTCC TCGGTGGAAT CTATCAGAAA
AAAAGTGAAA GCATGGTAGG GCCGTTGACG CGACAGTTTA TCCATCAAGT GCATTTCAGC
AAAGCATTTA TCGGTATTGA TGGCTGGCAG GCTGATACCG GTTTTACCGG ACGCGACATG
ATGCGATCGG ATGTGGTTAA CGCTGTTCTG GAAAAAGGCT CAGAAGCGAT TGTCCTCACC
GACAGCTCCA AATTTGGCTG TGTGCATCCC TATCCCCTGG GCCCGCTCTC TCGCTTCCAT
CGTGTCATTA CGGATTCCAA AATTTCCGCC AGCGATCAAA TGCAGTTAGA ACATGCGGGG
CTGCTAGTCA ATGTTATTGG CTCATCCGTT TAA
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| Protein sequence | MNSRQQSILQ MVVDKGQMSV AELAKITGVS EVTIRQDLNT LEKQSYLRRA HGFAVSLESD
DVETRMMTNY TLKRRLAEFA ASLVSPGESV FIENGSSNAL LARTLAEQKD VTIITVSSYI
AHLLKETPCE VILLGGIYQK KSESMVGPLT RQFIHQVHFS KAFIGIDGWQ ADTGFTGRDM
MRSDVVNAVL EKGSEAIVLT DSSKFGCVHP YPLGPLSRFH RVITDSKISA SDQMQLEHAG
LLVNVIGSSV
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