| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1612 |
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| Symbol | |
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| ID | 6872404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1554476 |
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| End bp | 1555522 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642784757 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_002215425 |
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| Protein GI | 198243766 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.000000000117623 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAATTGT TGTCTGAATA TGGCTTATTT TTGGCAAAAA TCGTCACCGT TGTGGTGGCC
ATTGCCGTCA TTGTGCTGCT GATCGTGAAT GCTACGCAAC GCAAACGTCA GCGCGGCGAG
CTGCGCGTGA CCAATTTGAG CGAGCAGTAT CAGGAGATGA AGGATGACCT TGCTGCGGCG
TTGATGGATG GCCATCAGCA AAAACTGTGG CATAAAGCGC AGAAAAAAAA GCATAAGCAG
GAGGCGAAAG CCGCCAAAGC GAAAGCGAAG CTGGGGGACA TTGCGACATC GGACAAACCG
CGCGTATGGG TGATAGATTT CAAAGGCAGT ATGGACGCTC ACGAAGTTAA TGCGTTACGC
GAAGAGGTCA CGGCGGTGCT GGCAGTGGCG AAACCCGGCG ATCGGGCGGT TGTGCGTCTG
GAAAGCCCCG GTGGCGTTGT GCACGGCTAT GGCCTGGCGG CATCGCAATT GCAGCGCCTG
CGCGATAAAA ATATTCCGCT GACCGTGACG GTGGATAAAG TCGCGGCAAG CGGAGGCTAC
ATGATGGCCT GCGTGGCGGA AAAAATTATC GCGGCGCCGT TCGCTATTGT GGGGTCAATT
GGTGTTGTCG CGCAAATCCC GAACTTTAAC CGCTTTCTCA AAAGTAAAGA CATTGATATT
GAACTGCATA CCGCAGGGCA GTACAAACGT ACCCTGACTT TGTTAGGCGA GAATACGGAA
GAAGGGCGGC AGAAGTTTCG TGAAGATCTC AACGAAACGC ACCATCTGTT CAAAGAGTTT
GTGCAGCGGA TGCGTCCGGC TCTGGACATT GAACAGGTCG CCACGGGCGA ACACTGGTAC
GGTCAGCAGG CGCTGGAGAA GGGACTGGTT GATGAGATTA ACACCAGCGA TGAGGTTATC
CTCGGCCTGA TGGAAGGGCG CGAGGTGCTG AATGTGCGCT ATATGCAGCG TAAAAAACTG
ATCGATCGTG TTACCGGCAG CGCGGCGGAA AGCGCGGATC GGCTGCTGCT GCGCTGGTGG
CAGCGTGGAC AAAAGCCGTT GATGTAA
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| Protein sequence | MELLSEYGLF LAKIVTVVVA IAVIVLLIVN ATQRKRQRGE LRVTNLSEQY QEMKDDLAAA
LMDGHQQKLW HKAQKKKHKQ EAKAAKAKAK LGDIATSDKP RVWVIDFKGS MDAHEVNALR
EEVTAVLAVA KPGDRAVVRL ESPGGVVHGY GLAASQLQRL RDKNIPLTVT VDKVAASGGY
MMACVAEKII AAPFAIVGSI GVVAQIPNFN RFLKSKDIDI ELHTAGQYKR TLTLLGENTE
EGRQKFREDL NETHHLFKEF VQRMRPALDI EQVATGEHWY GQQALEKGLV DEINTSDEVI
LGLMEGREVL NVRYMQRKKL IDRVTGSAAE SADRLLLRWW QRGQKPLM
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