| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1604 |
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| Symbol | trpD |
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| ID | 6872590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 1546900 |
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| End bp | 1548495 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642784750 |
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| Product | bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase |
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| Protein accession | YP_002215418 |
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| Protein GI | 198244045 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0512] Anthranilate/para-aminobenzoate synthases component II
[COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
[TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.262187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.00317716 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGATA TTCTGCTGCT CGATAACATC GACTCGTTTA CCTGGAACCT GGCAGATCAG
CTACGGACCA ACGGTCATAA CGTGGTGATT TACCGTAACC ATATTCCGGC GCAGACGCTT
ATCGATCGCC TGGCAACAAT GAAAAATCCG GTGCTAATGC TCTCCCCCGG TCCGGGCGTT
CCCAGCGAGG CAGGCTGTAT GCCGGAGCTG CTGACCCGAC TACGCGGCAA GTTACCGATC
ATCGGCATTT GTCTGGGGCA TCAGGCGATT GTCGAAGCTT ACGGCGGTTA TGTCGGTCAG
GCGGGAGAAA TCCTGCATGG CAAAGCCTCC AGCATTGAGC ATGACGGTCA GGCGATGTTC
GCCGGGCTGG CGAATCCGCT ACCGGTCGCG CGTTATCATT CGCTGGTCGG CAGTAATGTT
CCTGCCGGGC TAACCATTAA CGCCCATTTC AACGGCATGG TGATGGCGGT ACGTCATGAT
GCGGATCGCG TTTGCGGTTT TCAATTTCAT CCTGAGTCCA TCCTGACGAC ACAGGGTGCG
CGTCTACTGG AGCAAACATT AGCCTGGGCG CAGCAAAAGC TGGAACCGAC CAACACCCTA
CAGCCAATTC TGGAGAAACT CTATCAGGCG CAAACTCTGA CGCAACAAGA GAGCCATCAG
TTGTTTTCGG CGGTCGTCCG CGGCGAACTT AAACCTGAAC AGCTCGCCGC CGCGCTGGTG
AGCATGAAAA TTCGCGGCGA GCATCCCAAT GAAATTGCCG GCGCCGCCAC TGCGTTGCTG
GAAAATGCCG CCCCGTTCCC GCGCCCGGAC TACCTGTTTG CGGATATCGT TGGTACCGGC
GGCGATGGCA GTAACAGTAT CAATATCTCT ACCGCCAGCG CCTTTGTCGC AGCGGCCTGT
GGACTGAAAG TGGCGAAACA CGGCAACCGT AGCGTGTCCA GCAAATCGGG GTCATCCGAT
CTGCTGGCGG CGTTCGGTAT TAATCTGGAT ATGAACGCCG ATAAATCACG TCAGGCGTTA
GATGAACTGG GCGTCTGTTT CCTGTTCGCG CCGAAATATC ACGCCGGATT CCGTCACGCG
ATGCCGGTTC GCCAACAGTT AAAAACGCGA ACCCTGTTCA ACGTACTCGG CCCGCTGATC
AACCCGGCGC ATCCGCCGCT GGCATTGATT GGCGTCTATA GCCCGGAACT GGTGCTGCCG
ATTGCGGAAA CCTTACGGGT ACTGGGCTAT CAGCGCGCGG CGGTGGTACA TAGCGGCGGC
ATGGATGAGG TTTCGCTCCA TGCGCCGACG ATTGTCGCGG AGCTGCATGA CGGCGAAATT
AAAAGCTATC AACTTACGGC GGAGGATTTT GGCCTGACGC CTTACCATCA GGATCAGTTG
GCTGGCGGCA CGCCGGAAGA AAACCGTGAC ATTCTGACGC GGTTATTACA AGGTAAAGGC
GATGCCGCGC ATGAGGCCGC CGTCGCCGCC AACGTGGCGA TGCTGATGCG TCTGCATGGT
CAGGAAGATC TCAAAGCCAA CGCGCAAACC GTGCTTGATG TTCTGCGCAA CGGCACCGCA
TATGACAGAG TCACCGCACT GGCGGCAAGA GGGTAA
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| Protein sequence | MADILLLDNI DSFTWNLADQ LRTNGHNVVI YRNHIPAQTL IDRLATMKNP VLMLSPGPGV
PSEAGCMPEL LTRLRGKLPI IGICLGHQAI VEAYGGYVGQ AGEILHGKAS SIEHDGQAMF
AGLANPLPVA RYHSLVGSNV PAGLTINAHF NGMVMAVRHD ADRVCGFQFH PESILTTQGA
RLLEQTLAWA QQKLEPTNTL QPILEKLYQA QTLTQQESHQ LFSAVVRGEL KPEQLAAALV
SMKIRGEHPN EIAGAATALL ENAAPFPRPD YLFADIVGTG GDGSNSINIS TASAFVAAAC
GLKVAKHGNR SVSSKSGSSD LLAAFGINLD MNADKSRQAL DELGVCFLFA PKYHAGFRHA
MPVRQQLKTR TLFNVLGPLI NPAHPPLALI GVYSPELVLP IAETLRVLGY QRAAVVHSGG
MDEVSLHAPT IVAELHDGEI KSYQLTAEDF GLTPYHQDQL AGGTPEENRD ILTRLLQGKG
DAAHEAAVAA NVAMLMRLHG QEDLKANAQT VLDVLRNGTA YDRVTALAAR G
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