| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A1582 |
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| Symbol | oppB |
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| ID | 6872527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 1529121 |
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| End bp | 1530041 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642784729 |
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| Product | oligopeptide transporter permease |
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| Protein accession | YP_002215397 |
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| Protein GI | 198245863 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.733786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGAAAT TTATTTTACG CCGCTGTCTG GAAGCGATTC CGACGCTGTT TATTCTTATT
ACCATCTCTT TCTTTATGAT GCGCCTCGCG CCGGGTAGCC CTTTTACTGG CGAGCGCGCA
TTGCCGCCGG AAGTGCTGGC CAATATTGAA GCAAAATATC ATCTGAACGA TCCCATCATG
ACGCAGTACT TCAGCTACCT GAAGCAGCTG GCGCATGGCG ATTTTGGACC ATCGTTTAAA
TACAAAGATT ACACGGTCAA CGATCTGGTT GCCGCCAGCT TCCCCGTTTC GGCGAAACTT
GGCGCTGCCG CTTTTTTGCT GGCGGTCATT ATTGGTGTCA GTGCTGGCGT GATTGCCGCG
CTAAAGCAAA ATACGCGATG GGATTATACG GTGATGGGAT TTGCCATGAC CGGCGTCGTT
ATCCCCAGTT TTGTGGTAGC GCCGCTACTG GTGATGGTCT TTGCAATAAC CTTGCAATGG
CTGCCTGGCG GCGGCTGGAA CGGCGGGGCG TTAAAATTTA TGATCCTGCC GATGGTCGCG
CTTTCACTGG CCTATATTGC CAGCATCGCT CGTATTACGC GCGGCTCAAT GATTGAAGTT
CTGCATTCGA ACTTTATTCG TACCGCGCGG GCAAAAGGAT TACCGATGCG CAGAATCATC
TTCCGCCATG CGTTAAAACC TGCGCTGCTG CCGGTTTTAT CCTATATGGG GCCAGCCTTT
GTCGGCATTA TTACCGGCTC AATGGTGATT GAAACTATTT ATGGCTTACC GGGCATTGGG
CAGCTTTTCG TTAATGGCGC GCTCAACCGC GATTACTCGC TGGTGTTAAG TTTGACCATT
CTGGTCGGGG CGCTGACCAT ATTATTTAAC GCCATTGTCG ATGTGCTCTA TGCCGTTATC
GACCCGAAAA TTCGCTATTG A
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| Protein sequence | MLKFILRRCL EAIPTLFILI TISFFMMRLA PGSPFTGERA LPPEVLANIE AKYHLNDPIM
TQYFSYLKQL AHGDFGPSFK YKDYTVNDLV AASFPVSAKL GAAAFLLAVI IGVSAGVIAA
LKQNTRWDYT VMGFAMTGVV IPSFVVAPLL VMVFAITLQW LPGGGWNGGA LKFMILPMVA
LSLAYIASIA RITRGSMIEV LHSNFIRTAR AKGLPMRRII FRHALKPALL PVLSYMGPAF
VGIITGSMVI ETIYGLPGIG QLFVNGALNR DYSLVLSLTI LVGALTILFN AIVDVLYAVI
DPKIRY
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