Gene SeD_A1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A1578 
Symboltdk 
ID6875011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp1521988 
End bp1522605 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content49% 
IMG OID642784725 
Productthymidine kinase 
Protein accessionYP_002215393 
Protein GI198245086 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0557569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGC TATATTTCTA CTATTCGGCA ATGAATGCGG GTAAGTCGAC TGCACTGCTG 
CAATCTTCAT ACAATTATCA GGAACGCGGG ATGCGTACCG TCGTATATAC GGCGGAAATC 
GACGATCGTT TCGGCGCAGG CAAAGTCAGC TCTCGTATCG GTTTGTCGTC GCCGGCAAAA 
TTGTTTAACC AAAATACATC CTTGTTTGAA GAGATTCGTG CCGAGAGCGC GCGGCAGACA 
ATACATTGCG TGTTAGTCGA CGAAAGCCAG TTTTTGACTC GCCAGCAGGT TTATCAATTA 
TCCGAGGTTG TCGACAAATT AGATATTCCA GTACTTTGCT ATGGGCTACG AACAGACTTT 
CGTGGGGAGC TCTTTGTCGG CAGCCAATAC TTGCTGGCAT GGTCAGATAA GCTGGTGGAA 
TTAAAAACTA TCTGTTTCTG CGGTCGTAAA GCCAGTATGG TTCTGCGCCT TGATCAGGAC 
GGCAGGCCTT ATAACGAAGG CGAACAGGTG GTTATTGGCG GGAATGAACG CTACGTTTCA 
GTTTGCCGTA AGCATTATAA GGACGCGCTG GAGGAGGACT CACTGACGGC GATTCAGGAG 
CGTCATCGGC ACATATGA
 
Protein sequence
MAQLYFYYSA MNAGKSTALL QSSYNYQERG MRTVVYTAEI DDRFGAGKVS SRIGLSSPAK 
LFNQNTSLFE EIRAESARQT IHCVLVDESQ FLTRQQVYQL SEVVDKLDIP VLCYGLRTDF 
RGELFVGSQY LLAWSDKLVE LKTICFCGRK ASMVLRLDQD GRPYNEGEQV VIGGNERYVS 
VCRKHYKDAL EEDSLTAIQE RHRHI